KEGG   Brassica napus (rape): 106428600
Entry
106428600         CDS       T04128                                 
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
  KO
K17302  coatomer subunit beta'
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106428600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106428600
Membrane trafficking [BR:bna04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    106428600
Exosome [BR:bna04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   106428600
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_HPS5 Beta-prop_SPT8 PEP5_VPS11_N WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 WD_LRWD1 TPR_GEMI5 Clathrin WD40_like TPR_CcmH_CycH PH_SPO71
Other DBs
NCBI-GeneID: 106428600
NCBI-ProteinID: XP_048606511
LinkDB
Position
C3:71815762..71822381
AA seq 920 aa
MPLRLEIKKKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAQSFEVTDLPV
RSAKFIARKQWVVAGADDLYIRVYNYNTMDTVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MVIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSTKIKTFSKNFQ
EKRSIRPTFSAEKIFGGALLAMCSNDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRELVSSHFDSGRSTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNA
SWKLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLAKASEILPTIPKDQHNNVAHFLESRGMVEEALEAATDPDYRFELAIQLARLDIAQE
IAVEAQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSIGDAEGASKLATLA
KEQGKNNVAYLCLFMLGKLEDCLDLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
INSKAAESLADPEEYSNLFEDWQVALSVEAKASETRGVYTAAENYPSHADRSSMTLVEAF
RNLQVEEEESLENGDIEHGEEEVAEENGDEEKNDDDVEEQHDEQQREEVVDGDSTDGAVL
VNGSEADEEWGTNSEGNPSA
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgagatcaagaaaaaatttgctcaaaggtctgagagagtgaaatct
gtggatctgcatcctacagaaccatggattctagcaagtttgtattctggaaccttgtgt
atatggaactaccagacacaggtgatggcacagtctttcgaggtgaccgacttaccagtt
cggtcagccaagtttatagcacggaagcaatgggttgtggcaggagctgatgatttgtat
atccgtgtatacaattacaataccatggacacggttaaagtgtttgaggctcattcagac
tacattagatgtgtggctgttcatccaacgttaccatatgtgctgtcatcctccgatgat
atggtcataaagctttgggactgggaaaagggttgggcttgcactcagatattcgaggga
cactcgcactatgtgatgcaagtcacatttaatccaaaagacaccaacacttttgccagt
gcatcacttgatcgcaccataaagatctggaatcttggctcacccgacccaaattttaca
ctggatgcccatcagaaaggagtaaactgtgtagattatttcaccggtggtgacaagccc
tatttaattaccggctctgatgatcacactgctaaggtctgggactatcaaacaaaaagt
tgtgtccagacgctagacgggcacacacacaatgtgtcggcagtatgtttccatccagag
cttccaattataatcacaggttctgaagatggcaccgttcgtatctggcatgcaactacg
tacaggctagagaacacattaaattatggcctcgagagagtttgggccattggttacatt
aaaagttctcgccgggttgtgatcggatatgatgaaggaaccatcatggttaaacttgga
cgggaaattcctgtcgctagcatggacaatactggaaaaatcatatgggctaaacataat
gaaattcagactgcgaacatcaaaagtattggtgcagactacgaggttactgatggagag
aggttgcccttggctgttaaagagctggggacttgtgatctttatccacaaagcttgaaa
cacaatccaaatgggaggtttgtcgtagtctgtggagacggagagtatataatctacacg
gctttggcttggagaaataggtcatttggttctggactggaattcgtttggtcgtctgag
ggggagtgtgctgtaagagaaagctcaacaaagatcaagacatttagcaaaaatttccag
gaaaagaggagtatccgccctactttctccgctgagaagatctttggaggagccctgtta
gctatgtgttcaaatgatttcatctgcttttatgattgggctgaatgtaggcttattcaa
cgtattgacgtcactgtaaagaatctgtattgggctgacagtggtgatttagtagccatt
gctagtgacacgtcattctacatcttgaaatacaaccgagagttagtttcttcacatttt
gatagtggaagatctacggaggaagaaggtgttgaggatgcttttgaggttctccatgag
aacgatgaacgtgttaggacaggtatatgggttggtgactgtttcatttacaacaacgct
tcctggaagcttaactactgtgtcggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttattgggctatcttgcaaatcaaagtcgggtattccttgtagacaaagaa
ttcaatgttataggatacacgttgctgctaagcctgattgagtacaagactcttgtgatg
cgaggtgatctagccaaagccagtgaaatcttacctacaattcctaaagatcagcataac
aatgttgctcatttcttggagtcacgaggaatggttgaagaggctctggaagctgcgaca
gatcctgactacagatttgagttggccatacaactggctagacttgacattgcgcaggaa
atagctgtagaagcacagagcgagtctaagtggaagcaattaggagagttagcaatgtct
tccgggaagctacaaatggcagaggaatgcatgaaatatgcgatggatttgagtggtttg
ttactactttattcttctattggagatgctgaaggtgcgtcaaaacttgcaacacttgct
aaagaacaagggaagaacaatgtcgcctatctttgcctattcatgctgggaaaattggaa
gattgtttggacttattggtggagagcaaccggatacctgaagctgctctgatggcaaga
tcatatcttccaagcaaagtatctgagatagtagctctttggaggaaagatctcagcaag
attaattcaaaagcagcagaatctttggctgatcccgaggagtactcaaatctttttgaa
gattggcaagttgctctttccgtcgaagccaaagcttcagagacaaggggagtttataca
gctgcagaaaattatcctagccatgctgataggtcttccatgaccctcgttgaagccttt
agaaacttgcaagttgaagaagaggagtctcttgaaaatggagatatagagcacggggag
gaggaggtagcagaagaaaacggtgatgaagagaagaatgatgacgatgtagaggaacaa
cacgatgaacaacaacgagaagaagttgttgatggtgactcaaccgatggagctgttctt
gttaacggaagtgaggctgacgaagagtggggtacgaatagtgaaggaaacccatcagcc
taa

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