Brassica napus (rape): 106428600
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Entry
106428600 CDS
T04128
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106428600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106428600
Membrane trafficking [BR:
bna04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106428600
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106428600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_WDR41
Beta-prop_RIG_2nd
ANAPC4_WD40
ASA1
Beta-prop_IFT140_1st
CFAP251_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_NOL10_N
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_Nup120_160
WD_LRWD1
Clathrin
TPR_GEMI5
TPR_CcmH_CycH
PH_SPO71
Motif
Other DBs
NCBI-GeneID:
106428600
NCBI-ProteinID:
XP_048606511
LinkDB
All DBs
Position
C3:71815762..71822381
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AA seq
920 aa
AA seq
DB search
MPLRLEIKKKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAQSFEVTDLPV
RSAKFIARKQWVVAGADDLYIRVYNYNTMDTVKVFEAHSDYIRCVAVHPTLPYVLSSSDD
MVIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTIMVKLG
REIPVASMDNTGKIIWAKHNEIQTANIKSIGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSEGECAVRESSTKIKTFSKNFQ
EKRSIRPTFSAEKIFGGALLAMCSNDFICFYDWAECRLIQRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRELVSSHFDSGRSTEEEGVEDAFEVLHENDERVRTGIWVGDCFIYNNA
SWKLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVFLVDKEFNVIGYTLLLSLIEYKTLVM
RGDLAKASEILPTIPKDQHNNVAHFLESRGMVEEALEAATDPDYRFELAIQLARLDIAQE
IAVEAQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSIGDAEGASKLATLA
KEQGKNNVAYLCLFMLGKLEDCLDLLVESNRIPEAALMARSYLPSKVSEIVALWRKDLSK
INSKAAESLADPEEYSNLFEDWQVALSVEAKASETRGVYTAAENYPSHADRSSMTLVEAF
RNLQVEEEESLENGDIEHGEEEVAEENGDEEKNDDDVEEQHDEQQREEVVDGDSTDGAVL
VNGSEADEEWGTNSEGNPSA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgagatcaagaaaaaatttgctcaaaggtctgagagagtgaaatct
gtggatctgcatcctacagaaccatggattctagcaagtttgtattctggaaccttgtgt
atatggaactaccagacacaggtgatggcacagtctttcgaggtgaccgacttaccagtt
cggtcagccaagtttatagcacggaagcaatgggttgtggcaggagctgatgatttgtat
atccgtgtatacaattacaataccatggacacggttaaagtgtttgaggctcattcagac
tacattagatgtgtggctgttcatccaacgttaccatatgtgctgtcatcctccgatgat
atggtcataaagctttgggactgggaaaagggttgggcttgcactcagatattcgaggga
cactcgcactatgtgatgcaagtcacatttaatccaaaagacaccaacacttttgccagt
gcatcacttgatcgcaccataaagatctggaatcttggctcacccgacccaaattttaca
ctggatgcccatcagaaaggagtaaactgtgtagattatttcaccggtggtgacaagccc
tatttaattaccggctctgatgatcacactgctaaggtctgggactatcaaacaaaaagt
tgtgtccagacgctagacgggcacacacacaatgtgtcggcagtatgtttccatccagag
cttccaattataatcacaggttctgaagatggcaccgttcgtatctggcatgcaactacg
tacaggctagagaacacattaaattatggcctcgagagagtttgggccattggttacatt
aaaagttctcgccgggttgtgatcggatatgatgaaggaaccatcatggttaaacttgga
cgggaaattcctgtcgctagcatggacaatactggaaaaatcatatgggctaaacataat
gaaattcagactgcgaacatcaaaagtattggtgcagactacgaggttactgatggagag
aggttgcccttggctgttaaagagctggggacttgtgatctttatccacaaagcttgaaa
cacaatccaaatgggaggtttgtcgtagtctgtggagacggagagtatataatctacacg
gctttggcttggagaaataggtcatttggttctggactggaattcgtttggtcgtctgag
ggggagtgtgctgtaagagaaagctcaacaaagatcaagacatttagcaaaaatttccag
gaaaagaggagtatccgccctactttctccgctgagaagatctttggaggagccctgtta
gctatgtgttcaaatgatttcatctgcttttatgattgggctgaatgtaggcttattcaa
cgtattgacgtcactgtaaagaatctgtattgggctgacagtggtgatttagtagccatt
gctagtgacacgtcattctacatcttgaaatacaaccgagagttagtttcttcacatttt
gatagtggaagatctacggaggaagaaggtgttgaggatgcttttgaggttctccatgag
aacgatgaacgtgttaggacaggtatatgggttggtgactgtttcatttacaacaacgct
tcctggaagcttaactactgtgtcggaggcgaggtaaccacaatgtatcatttggaccgc
ccaatgtatttattgggctatcttgcaaatcaaagtcgggtattccttgtagacaaagaa
ttcaatgttataggatacacgttgctgctaagcctgattgagtacaagactcttgtgatg
cgaggtgatctagccaaagccagtgaaatcttacctacaattcctaaagatcagcataac
aatgttgctcatttcttggagtcacgaggaatggttgaagaggctctggaagctgcgaca
gatcctgactacagatttgagttggccatacaactggctagacttgacattgcgcaggaa
atagctgtagaagcacagagcgagtctaagtggaagcaattaggagagttagcaatgtct
tccgggaagctacaaatggcagaggaatgcatgaaatatgcgatggatttgagtggtttg
ttactactttattcttctattggagatgctgaaggtgcgtcaaaacttgcaacacttgct
aaagaacaagggaagaacaatgtcgcctatctttgcctattcatgctgggaaaattggaa
gattgtttggacttattggtggagagcaaccggatacctgaagctgctctgatggcaaga
tcatatcttccaagcaaagtatctgagatagtagctctttggaggaaagatctcagcaag
attaattcaaaagcagcagaatctttggctgatcccgaggagtactcaaatctttttgaa
gattggcaagttgctctttccgtcgaagccaaagcttcagagacaaggggagtttataca
gctgcagaaaattatcctagccatgctgataggtcttccatgaccctcgttgaagccttt
agaaacttgcaagttgaagaagaggagtctcttgaaaatggagatatagagcacggggag
gaggaggtagcagaagaaaacggtgatgaagagaagaatgatgacgatgtagaggaacaa
cacgatgaacaacaacgagaagaagttgttgatggtgactcaaccgatggagctgttctt
gttaacggaagtgaggctgacgaagagtggggtacgaatagtgaaggaaacccatcagcc
taa
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