Brassica napus (rape): 106428627
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Entry
106428627 CDS
T04128
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bna
Brassica napus (rape)
Pathway
bna00040
Pentose and glucuronate interconversions
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106428627
Enzymes [BR:
bna01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
106428627
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
106428627
NCBI-ProteinID:
XP_013724825
UniProt:
A0A816KTZ3
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Position
C2:51290392..51293354
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AA seq
412 aa
AA seq
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MVSYSNSLFLYTFIFLISFGNTIAFSASSLPHVQDPNLVVDEVNRSVFNASRRSLAYLSC
RTGNPIDDCWRCDPNWETNRQRLADCAIGFGKHAIGGRSGRIYVVTDPANDDPVNPRPGT
LRHAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCIKIHYATNIII
HGINIHDCKPGSAGMIRDGPRHTGWWVKSDGDAVAIFGGKHVWIDHCSFSNCDDGLIDAI
HGSTAITISNNHMTHHDKVMLLGHHDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH
VVNNDYTHWEMYAIGGSASPTIFSQGNRFLAPNTRFNKEVTKHEDAPESKWRHWNWRSEG
DILLNGAYFQQSGARSSSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggtttcgtattctaatagtctttttctttacacttttatatttctcatatcattcggc
aacacgattgcattctcggcgagttcgttgccgcatgttcaagatcccaatctagttgtt
gatgaggtcaacaggagtgtattcaatgcatcaaggaggagcctggcctacctatcttgt
agaactggaaatcctatcgatgattgttggcgttgcgatccaaactgggagactaaccgc
caacggctagccgattgtgctatagggtttggcaaacacgctatcggaggccgcagtggc
cgaatttacgtggttacagatccggccaacgacgatccagtaaatcctagaccgggaacc
cttagacatgctgtcacgcaagaagagccattatggatcattttcaagagagatatggtc
attaggcttaagaaggaactgatcatcacatcttttaagaccattgatggtagaggctca
agtgttcacataaccgatggaccatgcatcaagatccactatgcaactaacatcatcatt
catggaatcaacatccatgactgcaaaccaggatcagctgggatgattagagatggtcca
cgtcacactgggtggtgggtcaaatcagatggagacgcagtggcgatatttggagggaag
catgtgtggatcgaccattgctcgttctcaaactgcgatgatggtctgatagacgccata
catggttcgacggctataactatatcgaacaaccacatgacgcaccatgacaaggtcatg
cttttaggacaccacgatagctacacacaggacaagaacatgcaagtcaccattgcgttt
aaccatttcggagaagggctcgttcaaaggatgccacggtgcaggcatggatatttccat
gttgtgaacaatgattatactcactgggaaatgtatgccatcggtggaagtgcttctccg
acgatattcagccaaggaaatagatttctcgctcctaatacccggttcaataaagaggtt
acaaaacatgaagacgcacccgaaagcaaatggagacattggaactggagatcggaaggg
gatatattgttgaacggagcatatttccagcaatccggtgctagatcttcatcaacttat
gcaagagcttctagtctaagcgcgaggccatcgtcgcttgtgggttccatcacgacgacg
gcaggaacactaagttgtcgtcgaggtcgtcgctgttaa
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