Brassica napus (rape): 106428733
Help
Entry
106428733 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106428733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106428733
03009 Ribosome biogenesis [BR:
bna03009
]
106428733
04131 Membrane trafficking [BR:
bna04131
]
106428733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106428733
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106428733
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106428733
Membrane trafficking [BR:
bna04131
]
SNARE
SNARE associated proteins
Others
106428733
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106428733
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106428733
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_2
AAA_33
AAA_16
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
AAA_17
RNA_helicase
AAA_28
nSTAND3
Mg_chelatase
ATPase_2
nSTAND_NTPase5
Parvo_NS1
AAA_18
Viral_helicase1
ABC_tran
NB-ARC
Vps4_C
AAA_7
AAA_lid_PRS2_C
NACHT
TsaE
IstB_IS21
DUF815
Zeta_toxin
AAA_24
ResIII
Motif
Other DBs
NCBI-GeneID:
106428733
NCBI-ProteinID:
XP_013724950
LinkDB
All DBs
AA seq
810 aa
AA seq
DB search
MSNQPESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPNAMEKLQLFRGDT
ILIKGKKRKDTVCIALADDSCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGTRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDESIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWE
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAA
DRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLSIF
KACLRKSPVAKDVDVRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRGENP
EAMEEDLVDDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGIGSEFRFDP
TASAGRTTGGASADPFATSAAAADDDDLYS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaacctgaatcttccgactcgaaatcgaagaaggacttcagcacagctatc
ctcgagaggaagaagtctcctaatcgtcttgttgtcgacgaagccatcaacgatgacaac
tccgtagtctctctccaccccaacgccatggagaagctccaactcttccgtggcgacaca
attctcatcaagggcaagaagaggaaggacactgtctgcatcgctcttgctgatgactcc
tgcgaggagcctaagatcaggatgaacaaagtcgtgaggtccaacttgagggttagactc
ggcgacgtcgtctccgttcaccaatgccctgacgtcaaatacggaacacgtgtccacatc
ttacccgttgatgacaccgttgaaggagtcaccgggaacctcttcgacgcttacctcaaa
ccttacttcttggaggcgtaccgtccagtgaggaagggtgatctattccttgtgagagga
ggaatgaggagtgtggagttcaaagttattgagactgatcctgctgagtactgtgtggtt
gctccagacactgagattttctgtgaaggggaaccgatcaagagagaggacgaagagagg
ctggatgaagtcggttatgatgatgttggtggcgtcagaaaacagatggctcagattaga
gaacttgttgagcttcctttgaggcatccgcagctcttcaagtccatcggtgtgaagccg
ccgaagggtatcttgctctatggacctcctggttccggaaagacactgatcgctcgcgcc
gtggctaacgaaacgggagcgtttttcttctgtatcaatggaccggagatcatgtcgaaa
atggccggtgagagtgagagcaacctcaggaaagcgtttgaagaggctgagaagaacgct
ccttccattatctttattgatgagattgactctattgcaccaaagagagataagactaat
ggtgaggttgagaggaggattgtctctcagctcctcacgcttatggatggtttaaagtca
cgtgcgcatgttatcgtcatgggagctaccaaccgtcccaatagtattgaccccgctttg
agaaggtttgggaggttcgacagggagattgacatcggtgttcctgatgagattgggcgt
cttgaggttcttaggatccacaccaagaacatgaagctagctgaagatgttgatctcgaa
agaatctccaaggacacgcatggatacgttggtgctgatcttgccgctctgtgcactgaa
gctgctcttcagtgtattagagagaagatggatgtgattgacttggaagatgagtctatc
gacgctgagattctcaactccatggcggtgtctaacgaacacttccacaccgctcttggg
aacagcaacccgtctgcactccgtgagaccgtcgtggaggtaccaaacgtctcctgggag
gatattggaggtcttgagaatgttaagagagagctgcaggagactgttcagtaccctgtg
gagcatccagagaagttcgagaaatttgggatgtctccatcgaagggagttttattctac
ggtccacctggatgtgggaagacactcttagccaaagccatagcgaacgagtgccaagca
aacttcatcagcgtcaagggacctgagcttctcaccatgtggtttggagaaagcgaagcc
aacgttcgtgagatctttgacaaggcgcgtcagtccgcgccttgtgttctcttcttcgac
gagctggactccatcgctactcagagaggaagcagcgtgggggacgcaggaggcgcggcg
gatagagttttgaaccagcttttgactgagatggatgggatgaacgctaagaagactgtc
ttcatcatcggagcgactaacagacccgacattatagatccagctcttctccgaccggga
aggctcgaccagctcatctacattcctctccccgatgaggagtcccgtctcagcatcttc
aaggcgtgtttgaggaagtctcccgttgctaaagacgttgacgtgagggccctcgctaag
tacactcaggggttcagcggcgctgacatcactgagatttgccagagggcgtgcaagtac
gctattagagagaacatcgagaaggatattgagagggagcgtaggaggggggagaatcca
gaggcgatggaggaggatttagtggatgatgaggtggcggagattagagctgctcatttc
gaggagtcgatgaagtatgcgaggaggagtgtgagtgatgctgatattcgcaagtaccag
gcctttgctcagacgctgcagcagtctagagggattgggagtgagttcaggtttgatccg
accgcgtctgctggacggaccactggtggtgcatctgctgatccctttgctacttcagct
gctgctgcagatgatgatgatctctacagttaa
DBGET
integrated database retrieval system
