KEGG   Brassica napus (rape): 106428751
Entry
106428751         CDS       T04128                                 
Name
(RefSeq) inactive squalene synthase 2
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
bna  Brassica napus (rape)
Pathway
bna00100  Steroid biosynthesis
bna00909  Sesquiterpenoid and triterpenoid biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    106428751
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    106428751
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bna01006]
    106428751
Enzymes [BR:bna01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     106428751
Prenyltransferases [BR:bna01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   106428751
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 106428751
NCBI-ProteinID: XP_048633067
LinkDB
Position
A3:30627877..30629726
AA seq 285 aa
MGSLSTILIHPDEIYPLLKLKLAITKAQKQIPLDPHLTFCYSTLNKVFKTFSLIIQQLGT
ELRDAVCVFYLILRALDTVEDDTSIPTEIKVPIRIAFHRHIYDRDWHFVCGEEKYKVLME
QFHHVSAAFLELEKGYQEIIEDITKRMGAGMAKFISKEVETVDDYDEYCHYAAGLVGLGM
SKLLLSSELETVTPNWEQLSNSTGLFLQDLKDEDKSTKAVQCLNDMITNALIHVEDCLKS
MAALHDPAILQSCSIPPLYTETMAALHDPAISCMILQYYSFAKEF
NT seq 858 nt   +upstreamnt  +downstreamnt
atgggaagcttgagtacgattctaatacacccagatgaaatatatccactcttgaagttg
aagcttgcgattacgaaagctcagaaacagatcccacttgatccacacttgactttctgt
tactcaactctcaacaaagtttttaaaacgttttctcttattattcagcaactaggcacc
gagctacgtgacgctgtgtgtgtgttctacttgattctccgagctcttgatactgttgag
gatgacacaagcattccaactgagatcaaggttccaattcgtatagctttccaccgccac
atatacgatcgtgactggcattttgtatgtggtgaggaaaagtacaaggttctaatggag
caatttcatcatgtgtctgcagcatttctggagcttgaaaaaggatatcaagagattatt
gaagatataactaaaagaatgggtgcaggaatggccaaattcatttccaaggaggtagaa
acggttgatgattatgatgaatactgtcattatgctgctggacttgtgggtttgggtatg
tctaaacttctcctctcttcagaactagaaacagtaactccaaactgggagcagctttcc
aattctacaggtttatttttgcaggacttgaaagatgaggacaaatcaacaaaagcagtg
cagtgtttgaatgatatgatcactaacgcattgattcatgttgaagattgtttgaaatct
atggctgcattgcatgatcctgcaatattacagtcttgttccatccctcctctatataca
gaaactatggctgcattgcatgatcctgcaatatcctgcatgatcctgcaatattacagt
tttgcaaaagaattttaa

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