KEGG   Brassica napus (rape): 106428836
Entry
106428836         CDS       T04128                                 
Name
(RefSeq) LOW QUALITY PROTEIN: denticleless protein homolog
  KO
K11790  denticleless
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106428836
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     106428836
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR11_1st Beta-prop_Nup120_160 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_Vps41 WD_LRWD1 TAF1C_beta-prop
Other DBs
NCBI-GeneID: 106428836
NCBI-ProteinID: XP_048595260
LinkDB
Position
A9:2127747..2130799
AA seq 532 aa
MQRTCPSFSLFSDSICGEAPMENSRSRSVFVDIGLRELNGFRVRKRPFFFADSELVCREI
AGVAVEHDGDRTPPLAVSFCKGSRKSQLFAVSDEDGHVSLFNSNHKFDSSATHQENTDNA
RLSDWVAHYNAVFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSH
PTRSDLLVSGSRDGCFALWDFRCKSSSHKEEFCINYTGMVKGAHLSPLSKRIRRSKAASS
SITSVLYLKDEITIATAGAPDSALKFWDTRKLKVPFAQASPQSDSTNTKEKRAHGIVSLS
QDSSGTLLTASCKDNRIYLYNILQLDKGPVQSFSGCRIDSFFVRTMISPDGEYILSGSSD
GNAYIWQVNKPQVDPTILKGHDSEVTAVDWSSSXIGKVATASDDFTVRLWNIENNLCTTA
NASRVKRRVTALSNTEAAKERLEMNREPESPQKHSSDDGDDNNDNQSMPVIRTPETQRKK
TSLSSSVSLSASEEDKTCERTPETAVDSPLSVLNPPSSVKRRTIRDYFLVTP
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgcagcgtacgtgtccatcattctctcttttctccgattcgatttgcggagaagctccg
atggaaaactccagatccagatccgtcttcgtcgacatcggactaagagagctcaacgga
tttcgagtaaggaagcggccgttcttcttcgcagattccgagctggtttgcagagaaata
gccggcgtagctgtcgaacacgacggcgatcggactcctcctttggccgtttcgttctgt
aagggtagcaggaagtctcagttattcgcggtgtcagatgaggatgggcatgtgagcttg
tttaattcgaatcacaagtttgactcttctgcaactcaccaagagaatacagataatgcc
aggcttagtgactgggttgctcattataatgcggtgtttgacatttcttggatcaaggga
gatagttgtcttctgactgcttctggtgatcaaactattaaagtatgggatgttgaggag
aataaatgtactggagtccttataggacacacaggaactgttaaatcaatgtgctcacat
ccaacacgttctgatcttcttgtctctggctccagagatggatgttttgcgctatgggat
tttagatgcaaaagtagctctcacaaagaggagttttgcatcaactatactggtatggtt
aaaggagctcatctttctcctctttcaaaacgaatcagacgtagcaaggctgcttcatca
agcattacctctgtgctttatctcaaagacgagatcacaatcgccacagctggagcacca
gatagcgcattaaaattttgggatacaagaaagctgaaagttccttttgctcaagcatct
ccacaatcagactcaacaaacactaaggaaaagagagcacatggtatagtatcattgtcc
caagactcaagtggaaccttactcacagcatcatgcaaggacaacagaatatatctatac
aacatactgcagcttgacaaaggacctgtacaatctttctctggttgcaggatagattct
tttttcgtaaggacaatgattagtcctgatggtgaatacattttgagcggttcaagcgac
ggtaacgcttacatatggcaggtcaataagcctcaagtggatcctacaatcttgaaaggc
catgactctgaagtaaccgcagtagactggtcttcatcatagatagggaaggtagcaaca
gcgtcagatgatttcacggtaagactgtggaatatagagaacaacctttgcacaaccgca
aacgcatcaagagttaaacgcagagtaactgcattgtcaaatactgaagcagccaaagag
agacttgagatgaacagagaacctgagagtccccaaaagcattcatcagatgatggtgat
gacaataatgataatcagtcaatgcctgtcattagaactccagagactcagagaaagaaa
acatcgttatcatcatcagtgtcattatcagcctcggaggaagacaaaacatgcgagaga
acaccagaaaccgcggttgacagtccattgtctgtcctaaaccctccttcctctgtcaaa
agacgaaccattagagattattttcttgtcactccctaa

DBGET integrated database retrieval system