Brassica napus (rape): 106428963
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Entry
106428963 CDS
T04128
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106428963
09122 Translation
03013 Nucleocytoplasmic transport
106428963
03015 mRNA surveillance pathway
106428963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106428963
03041 Spliceosome [BR:
bna03041
]
106428963
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106428963
TREX complex
106428963
Spliceosome [BR:
bna03041
]
Complex C
Other components
EJC/TREX
106428963
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106428963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
106428963
NCBI-ProteinID:
XP_013725162
UniProt:
A0A078J0Z5
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All DBs
Position
A3:complement(314353..316039)
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AA seq
292 aa
AA seq
DB search
MAGGLDMSLDDLIKSNRKPTGSRGRGNGGASSGGRGFGGGSSGPSRRFANRVGNRTAPYS
RPIQQQAHDAMWANDVFATDASVAAAFGHQSAGVGVGGSSIETGTKLYISNLDYGVSNED
IKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGDALAAVKRYNDVQLDGKLMKIEIV
GTNLSAPAPPMLAPVQIPFPSNGLLGNFNENYNGNFNGNYNGNFRGRGRGGFMGRPRGGF
GGGNFRGGRGARGGGGGGGRGSGRGGRDEKVSAEDLDAELDKYHKEAMEETS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggtttggatatgtcactcgatgacctcatcaaatccaatcgaaaacctacc
ggatctcgcggccgaggaaacggcggtgctagcagcggcggtcgcggattcggcggtggc
tcctccggtccgtctcgacggtttgctaaccgcgtgggaaacagaacggcgccgtattca
aggccgattcaacaacaagctcatgacgcgatgtgggctaacgacgtcttcgccactgat
gcgagtgtggcggctgcttttgggcatcagtctgcaggtgttggcgttggtggttcttca
atcgagactggaacgaagctctacatctccaacttggactatggtgtctccaacgaggat
atcaaggagctcttctcagaggttggtgaccttaagcgttacgggattcactatgatagg
agtggaagatccaagggtactgctgaggttgttttttcacggcgtggtgatgccttggca
gctgtcaagcgttacaatgatgttcagttggatggaaagctgatgaagattgagattgtt
ggaacgaatctttcagctccagcacctcctatgcttgctcctgttcaaattccatttcct
tcgaatgggttacttgggaactttaatgagaactacaatggaaacttcaatgggaactac
aatggaaactttagagggagaggaagaggtggttttatgggacggcctcgtggtggtttt
ggaggtggtaatttccgtggtggtaggggagctagaggaggaggaggaggtggtggtcgt
ggcagtggaagaggaggacgtgatgaaaaggtgtctgcagaggatcttgatgctgaattg
gacaagtatcacaaagaggcaatggaggaaacaagttaa
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integrated database retrieval system