KEGG   Brassica napus (rape): 106429023
Entry
106429023         CDS       T04128                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bna03036]
    106429023
   03400 DNA repair and recombination proteins [BR:bna03400]
    106429023
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    106429023
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     106429023
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT HEAT_EZ HEAT_2 TOR1L1_N
Other DBs
NCBI-GeneID: 106429023
NCBI-ProteinID: XP_013725221
LinkDB
Position
C2:complement(52415612..52421503)
AA seq 1124 aa
MAALNNLTEHLEAFVDVTRSPTHHAESLKAIATSLEKGVLSINQLVVEMDMYLTTTDDVV
RARGILLLAEMLDYLKSKPLDNAVVHSLIGFFTAKLAEWRSVRGALSGCLALIKRKGVAG
VVTAVDAEAVAKSMAQSIQVQSLALYDRKLCFELLECLLEQYPEAMINLGDLMVYATCEA
IDGEKDPPCLMIAFHVVELLARLFPSPSGPVASEASDLFEFISCYFPLHYTHTKGDEASI
PREDLSRGLSLAISSTPFFEPYAIPLLLEKLSASLPVAKVDSLKCLKDCAVNYGVSRMKK
HYKDLWPALKDALYASTKTDLSFGLESLTSPGFEMGEIHREAVNLLQRLVKQDISFLGLV
VEDIRVNMVFDTISRYLRYEEMLDTSKLEVLVVSQILSVSARSSVESCNIIFETFFSRLM
NTLGIVEKTSPGDLVHNENSTVSTRLYHGGLHLCIELLTASKDLIPSSEECTSTPESAQQ
SWCSIVNRFSASLIEAFTSAVQSSNDDCSADAYLGVKGLLAMGMFRGGSSPVSRSEFEKI
LTTLTSIIAANSAKTVKWELALKALVCMGSFIDRYSESEKAMSYMAIVVENLVSLVRSSH
CSLPHPMILEATSEVCSTMPTYVEKMVEGFEEAFCSSFSDFCVNGNFKSIENCSQLLECV
TNKLLPRLTEIDGLEKSLVNFAISMWNQIESSIVFSYDFNGREFVEAAMKTMGEIVGVAS
VDSQNSIIQKAYNVISSSTLPAMESIPLTVAALEGLQRNLSTRDELILSLFASVIIGASP
KASIPDVKSLVDLFLVSFLKGYIRAAQALGSMINKLVTGSGGTNISTDCSLEEACDIIFH
ESDSSKTICGSETFLGKICLGFCGSLDLQTRAITGLAWIGKGLLMRGDKRVNEIALVLME
CLKSTNSSGNALHPSAMKHAADAFLTLMSDSEVCLNRKFHAVIRPLYKQRFFSITVPILE
SLIVNSQTPLSRTMLHVALAHVVSNVPVTVILDNTKKLLSVILEGLSVLSVDSVHKETLF
SLLLVLSGTLTDIKGQQSVSDNAHRIIECLVKLTSYPHLMVVRETAIQCLATLLELPHGR
IYPFRREVLQAVTKALDDPKRRVREEAIKCRQAWTSISSRSTPF
NT seq 3375 nt   +upstreamnt  +downstreamnt
atggctgcactgaataatctcaccgagcatctcgaagctttcgtcgacgtcactcgttcc
cctactcaccatgctgagagtctgaaagcgattgctacttccttggagaagggtgtcttg
tctataaaccaattggtcgtggagatggacatgtatttgacgactactgatgatgttgtc
cgagcacgaggtattctcttgcttgcggagatgctggattatctaaagtcaaagcctttg
gacaatgcagttgtccatagtctcattggtttctttaccgctaagctggcagagtggaga
tcggtgcgaggtgcactttctggttgcttggctctgattaagaggaaaggcgtagctggt
gtggtcactgctgttgatgcagaagctgtggccaagtcaatggcacagagtattcaagtg
cagtctttagcactgtatgatcgcaagctctgttttgaactgttggagtgccttctagag
caataccctgaagctatgataaatttgggagatttgatggtttatgctacatgcgaagcc
atcgacggagaaaaagaccctccatgcttaatgatagcttttcatgtagtggagcttttg
gctcgattgtttcccagcccctccggtccagttgcgtctgaggcatctgatctttttgag
tttataagttgctacttcccacttcactatacgcatacaaaaggtgatgaagctagtatt
ccaagagaagacctttcaaggggactatctctggcaatctcttcgacgccttttttcgaa
ccgtatgctattccattgcttcttgaaaagctttcagcttctctaccagtcgcaaaggtt
gattctttgaaatgtctgaaagattgcgctgtgaactatggagtaagcagaatgaagaag
cactataaagatctttggcccgctttaaaagatgcactttatgcttccactaagacagat
ttgtcctttggtctagaatccctcactagtccagggtttgaaatgggtgagatccacaga
gaagctgttaatcttcttcagaggcttgtcaagcaagatatctcgtttttaggtcttgtt
gttgaagatatacgcgtaaacatggtcttcgataccatttctagatacttgcggtatgaa
gaaatgcttgacacgagcaaactggaggttcttgttgtcagtcagatactgtctgtgtct
gccagatcttctgttgagtcatgcaatataatctttgaaacctttttctcccgccttatg
aatactctagggattgttgagaagacgtcacctggtgatcttgttcacaacgaaaactcg
actgtttctactagactctaccatggaggtcttcatctttgcatcgaacttcttacagca
tcaaaagatcttattccgagttccgaggaatgtacctcaacacctgaaagcgcgcagcaa
tcatggtgctctatagttaacaggttctcagcttcactgatcgaggcgttcacttctgca
gtacaaagctctaatgatgattgtagtgcagatgcatatcttggagttaagggtttgctg
gctatgggtatgttccggggcggctcttctcctgtatcgagatctgaattcgagaagata
ttgacgaccttaacatcaatcatcgcagccaatagtgccaaaacagtgaagtgggaattg
gcattgaaagcgcttgtctgcatgggttcatttattgatcggtattctgagagtgaaaag
gctatgagctacatggctatagttgtcgaaaatttggtctcgctggttcgctctagtcat
tgttctcttccacatccaatgatattagaagcaacttcagaagtttgctctactatgcca
acgtacgtagagaaaatggttgaaggatttgaagaagctttctgctccagtttctctgat
ttctgtgtcaatggaaacttcaagtcaatcgaaaattgttctcagctcctggagtgtgtg
accaataaattgcttccacgtctgacagagatcgatggtctcgagaaaagcttggtgaat
tttgctataagtatgtggaatcaaattgaatcctctattgttttcagttatgattttaat
ggcagggagtttgttgaggcagcaatgaaaacaatgggagaaattgtaggagttgcttcg
gtagattcacagaatagtataatccaaaaagcttataatgtgatctcatcaagcacgctt
ccagcgatggagtcgatacctctgaccgttgctgcactagagggtttacaacgcaacctg
tccactagggatgaattgatactttcactatttgcgtcagttatcataggtgcatctccc
aaggcatccattccagatgtgaagtcacttgtagatctgtttttggtatcctttcttaag
ggttatatccgagcggctcaagctttgggttcaatgattaacaaattggtgacgggttct
ggtggaacaaatatctcaaccgattgttccttggaagaagcatgtgatataatatttcac
gagagcgactctagtaaaactatatgtggaagtgagacatttttgggaaagatatgttta
ggtttctgtggttcgctggaccttcagacccgcgccatcacaggtctagcgtggattggg
aaaggtttactcatgcggggtgataaaagagttaatgaaatagctctggtactaatggaa
tgcttaaaatcaactaacagttccgggaatgctctgcatccttctgccatgaaacatgca
gctgatgcattcctcacactaatgtctgattcggaagtgtgtctgaacagaaagtttcat
gcagttatacggccactctataagcaacggtttttctctataacagttcctattttggag
tcgttgattgtgaattcccagactccactctcaaggacaatgttgcatgtcgctctcgcg
catgttgtatccaacgttccagttacggtcatattggacaataccaaaaagctgctctcg
gtgatattggaaggcttgtctgtcttaagcgttgactctgtgcataaagaaacacttttc
agtctgttactggttttatctggaacgcttactgatattaaaggtcaacaatcagtcagt
gataatgcacacagaatcatcgaatgcctggtcaagcttacatcatacccacatctaatg
gttgtaagggagacggcgattcagtgtcttgctactttgttggaattgccccatggaaga
atctatcctttcagaagagaggttttacaagcagtaacaaaggcactcgatgatccaaaa
cgtagagttagagaagaagcgattaaatgcaggcaggcttggacgtcgatctcatccagg
agtacccctttctga

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