KEGG   Brassica napus (rape): 106429045
Entry
106429045         CDS       T04128                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1-like
  KO
K08266  target of rapamycin complex subunit LST8
Organism
bna  Brassica napus (rape)
Pathway
bna04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    106429045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106429045
Membrane trafficking [BR:bna04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    106429045
   mTORC2 complex
    106429045
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_HPS5 Ge1_WD40 PROPPIN Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N eIF2A RMC1_N Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 106429045
NCBI-ProteinID: XP_048597490
LinkDB
Position
A9:39720978..39723329
AA seq 328 aa
MSQPSVIIATASYDYTIRFWEAQSASCYRAINCPAVPQRELDEGRNPQHVNKLEISPDKR
YLAAACNPYIRLFDINSHHGHVRTFVGHTSNVMAVGFHADGNSMYSGSEDGTVRIWDLRA
PNRPEVYERNCLKAYHLDGSVTPINTVVLHPNQIELISGDQDGIIRVWDTRMNSCTIELV
PEPDTAIRSLSVMRDGTMLAAANDGGTCFIWNILRESQVTTEFEPIHKLQAHDRQILKCV
LSPDNKYLATASSDKTVKIWNVDSFTLDKVLTGHQRWVWDCAFSVDAKFILTASSDMTAR
LWSMEEGNELRVYRGHNKAIVCCALNDV
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagtcagccttccgtgattatcgcaactgctagctacgattatacaatccgattctgg
gaagcccaatccgctagctgttaccgtgccatcaactgtcctgctgtgcctcaaagagag
ctcgatgaaggccgtaaccctcagcatgtgaacaagctcgagataagcccagataagcgt
tacctagcagcagcttgcaacccttatatacggctctttgatatcaattcccatcatgga
catgtgaggacttttgttggacacaccagcaatgttatggccgttgggtttcatgctgat
ggcaattcgatgtactcaggatcagaggatggcacagttaggatctgggacttgagggct
cctaatcgaccagaggtgtacgaacggaattgcctaaaggcatatcacttggatggaagt
gttaccccaattaacacagttgttttacatccaaatcagattgaactgatatctggagac
caagatggaattatacgtgtatgggataccagaatgaattcatgtaccattgaactggta
ccagaacctgatacagctatacggtctttatcggttatgagggatgggacaatgttggct
gctgctaacgacggtggcacatgttttatatggaacatcttgcgtgaaagtcaggtgaca
accgagtttgagcccattcataagcttcaagctcatgatagacagatccttaaatgtgtc
ctatctcctgacaacaaatatctagcgactgcatcctctgataaaactgtcaaaatctgg
aacgtcgacagtttcacgctagataaagtgttaacaggacatcagagatgggtctgggac
tgcgccttctcagtggatgcaaaatttattttaacagcatcatcggacatgacggctaga
ttgtggtcgatggaagagggaaacgaactgagagtgtaccgaggtcataacaaagcaatt
gtgtgttgtgcactcaatgatgtctag

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