Brassica napus (rape): 106429555
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Entry
106429555 CDS
T04128
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106429555
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106429555
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106429555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
106429555
NCBI-ProteinID:
XP_013725756
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All DBs
Position
A7:complement(24221253..24225691)
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AA seq
1164 aa
AA seq
DB search
MNTLPVVSLTPSSSFKFFHFPSPLSHSPSFRFTTTPLILRPTPPSRQSHLSLKSLSPSQS
QLSEDYDEDEDEDEEDEDDDEAADEYDDITDETRNTDDDEPEFPVDSPPESSRQRVEFRW
QRVEKLRSLVRDFGVEMIDIDELVSIYDFRIDKFQRLAIEAFLRGSSVVVSAPTSSGKTL
IAEAAAVATVARGRRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGDSAINKDAQIVIM
TTEILRNMLYQSVGMASSGTGLFHVDAIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLIC
LSATVANPDELAGWIGEIHGKTELVTSTRRPVPLTWYFSTKHSLLPLLDEKGIHVNRKLS
LNYLQMSASEARYRDDDDGRRGRRSRKRGGDTSYNSLVNISDYPLTKNEINKIRRSQVPQ
ISDTLWHLQGKDMLPAIWFIFNRRGCDAAVQYVENFQLLDDCEKGEVELALRKFRVLYPD
AVRESAEKGLLRGIAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVI
SSLTKKAGNERIQLGPNELFQMAGRAGRRGIDDKGYTVLVQTAFEGAEECCKLVFAGVKP
LVSQFTASYGMVLNLVAGSKVTRKSNGSEDGKVLQAGRSLEEAKKLVEKSFGNYVSSNVM
VAAKEELAEIDKKIEILTSEISDEAIDKKSRKLLSANQYKEITALQGELREEKRKRTEFR
KRMELERFSALKPLLKGMEDGNLPFICLEFKDSEGMQQSVPAVYLGHIDSFNGSKLQKMM
SLDESFALNVIEDEPAADEPIVKPSYYVALGSDNSWYLFTEKWIRTVYRTGFPNTALAIG
DALPREIMKALLDKADMQWDKLSESELGSMWRMEGSLETWSWSLNVPVLSSLSEEDEVLH
MSQEYDNAAEQYKEQRSKVSRLKKRISRSAGFREYKKILENAKLTVEKMKRLKARSRRLI
NRLEQIEPSGWKDFMRISNVIHESRALDINTHLIFPLGETAAAIRGENELWLAMVLRNKV
LVDLKPPQLAGVCASLVSEGIKVRPWRDNNYIYEPSDTVVDVVNFLEEQRSSLIKLQEKH
EVEISCCLDVQFSGMVEAWASGLSWKEMMMECAMDEGDLARLLRRTIDLLAQIPKLPDID
PTLQRSAAAAADIMDRPPISELAG
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcttcccgtcgtctccctcacaccttcttcctccttcaaattcttccacttc
ccttctcctctctctcattccccatcctttcgcttcaccaccacacccctaatcctccgt
ccaacacctccttcaagacaatcccacctctccttgaagtctctgtcaccgtcccaatct
cagctctccgaggactacgacgaagacgaggacgaagacgaagaggacgaagatgacgac
gaagctgcagacgagtacgacgacatcaccgacgaaactcgtaacaccgacgacgacgag
cccgagttcccggtcgattcgccgccggaatcctctcggcagcgcgtggagtttaggtgg
cagagagtggagaagcttcgcagcctcgttcgagatttcggagtcgagatgattgatatc
gatgagctcgtttccatctacgattttcgaattgacaagtttcagaggttggctattgag
gcgtttctgagaggctcttcagtggtggtttctgctccgactagtagtgggaagaccttg
atagctgaagcagcagctgttgctactgtggctagaggtcggcggttgttctacactacg
cctcttaaagcgctctctaatcaaaagttccgcgagtttagggagacgtttggtgatgat
aacgttggtctactcactggtgactctgccatcaacaaagacgctcagattgtgatcatg
actactgagattctccgcaacatgttgtatcaaagtgttggaatggcttcttcaggaact
ggactttttcatgttgatgcgattgttttggatgaggttcattatttaagtgacatatct
agaggaactgtgtgggaagagattgttatttattgcccaaaggaggttcaacttatatgc
ctatcagccactgttgcaaacccagatgaattagctggttggattggtgagatacatggt
aagactgagttggtgacttcgacaagacgcccggttccattaacttggtacttctcaaca
aaacattctttactacctctgcttgatgagaaggggatacatgtgaataggaagctgtct
ctcaattatttgcaaatgtcagcctcggaagctagatatcgtgatgacgacgatggccgc
aggggaaggagatcaagaaaacgaggaggtgatacaagctacaacagcctcgtgaacatt
tctgattatcctcttacaaagaatgagattaacaagatccgccgttcacaggtgcctcaa
atcagcgacacgttatggcatctccagggaaaagatatgttaccagcgatatggttcatt
ttcaaccgtagaggatgtgatgcagccgtgcagtatgttgagaattttcagcttttagat
gattgcgagaaaggtgaagttgagctggccctgaggaagtttcgtgttctttatccagat
gcggtgagagagagtgcagagaaaggactgctaaggggaatcgctgcacatcacgcagga
tgtctacctctttggaaatcattcattgaggaactgtttcagcgaggacttgttaaggtt
gtcttcgccactgagacacttgctgctggaataaacatgccggccagaaccgctgttatt
tcgtctctgacaaagaaggctggtaatgagcggatacagttgggtcctaacgaattgttc
cagatggctgggcgtgctggaaggagagggattgatgacaagggctacactgtgctggtt
cagactgcttttgaaggcgctgaggagtgctgcaaacttgtctttgctggagtaaagcct
ctcgtgtcgcagttcactgcttcgtatggaatggtgttgaatcttgtagctggttcaaaa
gttactcgtaaatcgaatggaagtgaggacgggaaagtcttgcaagctgggagaagtctg
gaggaagccaaaaagttagttgagaagagtttcggaaactatgtgagcagtaacgtgatg
gttgctgccaaggaggagcttgctgaaatcgacaagaagatcgagattctgacgtcagag
ataagcgatgaggcgatagataagaagagcaggaagcttctgtcagcgaatcagtacaag
gagatcactgcacttcagggagagctgcgtgaagagaaacgcaagcgtactgaatttcga
aaaaggatggaactcgaaaggttctcagcattaaaaccgcttctaaaagggatggaagac
ggaaacttaccgtttatatgtttggagttcaaagattctgaagggatgcagcagtcagtc
cctgcggtttacttggggcatattgattcgtttaacggttcaaagcttcagaagatgatg
tctttggatgagtcctttgcactgaatgttatcgaggatgaaccggcggctgatgagcct
attgttaaaccatcttactatgtggctcttggctctgataactcgtggtatctcttcact
gagaaatggataaggactgtttacaggactggcttccccaacactgccttagcgatagga
gacgctttgcctcgagagatcatgaaggctcttcttgacaaagcagatatgcagtgggac
aaactatccgaatccgaactcggaagcatgtggagaatggaaggatctctagagacatgg
tcctggagtttaaacgtacctgtcctaagcagcctctccgaggaagacgaggtgttgcac
atgtcccaagagtatgacaacgctgctgaacaatacaaggaacaaaggagcaaagtgtcg
cggttgaagaagaggatatcaagatcagcagggttcagagagtacaagaaaattctagag
aacgctaagctgacggttgagaagatgaaacggctgaaggcgagatcgagacgcctcata
aaccgtttggagcagatcgaaccgtctggttggaaagacttcatgcgtataagcaatgtg
attcacgagagcagagcgttggacattaacacgcacttgatatttcctctgggtgaaaca
gctgctgcaatccgaggagagaacgagctctggctcgcaatggtgctccggaacaaagtc
cttgtcgatctcaagcctcctcagctagctggcgtatgcgcgagtttagtctccgaaggc
attaaagttcgaccgtggagagacaacaactacatatacgaaccgtctgatacagtagtt
gacgtggttaatttcttagaagagcaaagaagctcgcttattaagcttcaagagaagcat
gaggtggagatttcttgttgtctggatgttcagttctctggtatggttgaagcttgggct
tctggattaagttggaaagaaatgatgatggaatgtgcaatggacgaaggtgatcttgct
cgcctgttacgacgcaccattgacctcttggctcagattcctaagttgcctgatattgac
ccaacgctgcaacgtagtgcagcagctgcagcagatatcatggaccgtccaccaatcagc
gagcttgccggttaa
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integrated database retrieval system
