Brassica napus (rape): 106429991
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Entry
106429991 CDS
T04128
Name
(RefSeq) DNA topoisomerase 1 beta
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106429991
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106429991
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Topoisomerases
106429991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
106429991
NCBI-ProteinID:
XP_013726218
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All DBs
Position
C9:45014833..45019659
Genome browser
AA seq
902 aa
AA seq
DB search
MATEAFVKPVVPNGHDGYDDDDEDEMPLVFKRSSNNNNTSSSSNRPRPNNNAQKSSSIGS
TKSPPPSRSPLTSPNRSASSGRSSLMKPSLPSSSSVQRSTVKSPPVGDGRSLVAKERNGL
GKAPPVSKSDDEDSEDDKPLSARLKGDTKQASSSGRGSSQQPVQRSSVRPQGVNDNSRKK
DYDERVQTKTNVGGSSSSKPVNNDQKRPLVNNINRNGLKPKIEGNGSQAPAKRPLEKGNS
SNQSSVKRPKLSEPARPVKTEQGSRNAATAPDSEGNNLEALRANQATDKEDNSDGDDHVP
IASRIRQDSSNKKSSSVKPNASMIASSSRTIAKKPNKWAKDSKYSKSTRSLPSGDGQKKW
KTLEHNGVIFPPPYKRHGVKILYQGKPVDLTPEQEEVATMFAVMRETEYYNKQMFRDNFW
NDWRKILGKNHVIKNLDDCDFSPIYEWYMQEKEIKKQMSAEEKRILKEEKLAQEEKYMWA
VLDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPCDITINIGKEAPVPECPIPGER
WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSALKGQSDKEKYEKARKLKDRIGHIRA
AYTKDFSNKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVDCIPPNKL
KFDFLGKDSIQYVNTVEVEPPVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPALT
AKVFRTYNASITLDDMLSKETRDGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEK
LALKIEELREQIKELDIDLDRAKKGRTPLMGSDGKRKRNLTPEALEKKIMQTNAKIEKME
RDMQTKEDMKTVALGTSKINYMDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMDVDPEF
RF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggccactgaggcgtttgtgaaacctgtggtgccaaatggtcatgacgggtacgacgat
gatgatgaagatgaaatgcctttggttttcaagagaagcagtaacaataataatacatca
tcttcctctaatcgtccaaggcctaataacaacgctcagaaaagttcttctatcggttcc
accaagtccccaccaccatcgagatctcctttaacaagccccaatagatcggcttcttcc
ggaagaagttcactgatgaaaccgtcgttaccgtcatcttcttctgttcagcgttccacg
gtgaagtcgccgccagtaggggatggtagatcccttgttgctaaggagaggaacggtttg
ggaaaagctccacctgtgtccaaaagtgacgatgaggattctgaggatgataagcctttg
agtgccaggcttaaaggggataccaaacaggcgagctcttctgggcgtggtagctcgcag
cagccagtacaaaggagcagcgtgaggcctcagggagtgaatgataacagtagaaagaaa
gattatgatgagagagttcagacaaagaccaacgtgggtggatcatcaagtagcaagcct
gttaataatgatcagaagaggcctttggttaacaatatcaataggaatggtttaaagccg
aagatcgaagggaatggttctcaggcacctgcgaaaagacctcttgagaagggaaactct
tcgaatcagtcgtccgttaaaaggcctaagctatcagagccagctagacctgtgaaaact
gagcaaggctcgcgtaatgcagctacggcgccagatagcgaaggaaataatctggaggcg
ctgagagctaaccaagcaactgataaagaagataactcagatggtgatgatcatgtccct
attgcctcgaggataaggcaagattcctcgaataagaaatcatcgtccgtgaagccaaat
gctagtatgatagcttcttcgtccaggacaatagctaagaagcccaacaaatgggcgaaa
gattctaagtactcgaagtcgacaagatctttaccttctggagatgggcaaaagaaatgg
aaaacactagagcacaatggtgttattttcccacctccatataaacgtcacggggttaag
atattgtatcaggggaagccagttgacttgactcctgaacaagaagaggttgccactatg
tttgcagtgatgagagaaacagaatactacaataaacaaatgttcagagacaacttctgg
aatgattggcggaagatacttgggaagaaccatgtgattaaaaatctagatgattgtgat
ttcagtcccatatatgaatggtatatgcaggagaaggagataaagaaacaaatgagtgca
gaagagaaaaggattttgaaagaggagaagctagcgcaagaagagaaatacatgtgggct
gttcttgatggcgtcagagaaaaggttggaaatttcagagttgaaccccctggcttgttt
agaggccggggagaacatcctaagatggggaaactgaaaaagcggattcgtccttgtgat
attacaatcaacatcggtaaagaggcacctgttccagaatgtcctatccctggagaaaga
tggaaagaagttaagcatgacaatactgtcacctggcttgctttctggaatgatcctatc
aatccaaaagagttcaagtatgtattcttggcagctagtagtgctctaaagggacagagc
gacaaggagaagtatgagaaagcgaggaagcttaaggaccgtatagggcatattagagca
gcatacaccaaagattttagtaacaaggatgtaacaaagcggcaaatagcggttgctaca
tatctcatcgataagctagcccttagggctggaaatgagaaggacgatgatgaggcagat
actgtcggttgctgtacattgaaagtaggaaacgtggattgcattcctccaaataagtta
aagtttgacttcctcggtaaagactcgattcagtatgtaaacacagttgaggttgagcct
cctgtttataaggcaattgggcagttccaagcgggaaaatcaaaaaccgatgatctcttt
gacgagttagatacttcaaaactcaatgctcatcttaaggaacttatgcctgctctcaca
gccaaagtattccgtacatacaatgcatccatcacattggatgatatgttgagtaaagaa
acgagagatggagatgttcctgaaaaagtggtggtttatcaacaagcaaacaaggaggtc
gccatcatttgtaaccatcagcgtacagtctctaaatctcacggagcacaggtggagaag
ctggctttgaaaatagaagaactaagggagcaaataaaagagctggatatcgatctggac
agagctaagaaaggaagaacgccgttaatgggctctgatggaaagagaaagaggaatttg
acaccggaagctttggagaagaagataatgcaaacgaatgccaagatcgagaagatggaa
agggatatgcagaccaaggaagatatgaaaactgtagcattaggcacgtctaagatcaat
tacatggatcctaggatcactgttgcatggtgcaaaagacatgatgttcccattgagaag
atatttaacaagtctcttctggctaagtttgcttgggcaatggacgttgatcctgagttc
agattctga
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