Brassica napus (rape): 106430078
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Entry
106430078 CDS
T04128
Name
(RefSeq) RNA-binding protein BRN1-like isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106430078
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106430078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
106430078
NCBI-ProteinID:
XP_013726309
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Position
A2:complement(15571122..15574118)
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AA seq
445 aa
AA seq
DB search
MAEENREKNEGGEEEESVKVFVGQIPKHMSESQLLTLFQEFAVVDEVNIIKDKITRASRG
CCFVICPSREEADKLVNACHNKKTLPGAASLLQVKYADGELERLEHKLFVGMLPKNVSEA
ELLSLFSKHGTIKDLQILRGAQQTSKGCAFLKYETKEQAVSAMESINGKHKMEGSTVPLV
VKWADTERERHTRRLQKAQSHLTRLATADPTNPSLFGALPMSYAPPYNGYGYHQAPGTYG
YMLPPIQNQAPLPNLGNSNALQRTSPDSVPPRLARRNFPLPPANYMGSGYPPVRGLPYPL
AYPRGIMNPRPLSSSPGSISPGGSTPLGIGLSSVVQSQTEGPEGANLFIYNIPREYGDQE
LAAAFQPYGMVLSAKVFVDKATGVSKCFGFVSYDSQAAAQNAINMMNGRHLGGKKLKVQL
KRDDNNNNNNNNNNNNNNNNGQQSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaaatagggagaagaatgaaggaggagaagaagaagagagcgttaaggtt
ttcgtgggacaaataccgaaacacatgtcggaatctcaactccttacattgtttcaagag
ttcgctgtcgtcgacgaggttaacatcattaaggacaagatcacacgcgcctctcgagga
tgttgttttgtaatatgtccatcgagagaggaagcagataagctggtcaatgcttgtcat
aacaagaagacattacctggtgcagccagtctattgcaagtaaagtatgcagatggcgaa
ctggaaaggctagagcacaagctttttgtcggtatgcttccaaagaatgtctctgaagct
gaacttctatcgttattctccaagcacggcaccataaaggatctacagattctaagaggt
gctcaacaaacaagcaaaggctgtgcttttctcaagtatgagacaaaagaacaagctgtt
tctgccatggaatccatcaatggaaaacacaaaatggagggttcaactgttcctttagtt
gtcaaatgggcagacacagaaagggagagacacacaaggagacttcaaaaggctcaatct
cacctcactcgattagctaccgctgatccaacaaacccctcattgtttggagcattaccc
atgagctatgctccaccatataatggatatggttaccaccaagctcctggaacttatggc
tacatgctaccaccaattcagaaccaagctccattacccaatctaggtaatagcaacgcg
ctgcaaagaacctcacctgactctgtgccacctcgcttggcccgtaggaactttcctttg
cctccagcaaactacatgggctctggctatccccctgtgagaggtctcccttatccattg
gcttatcctagagggattatgaatcctcgccctctaagtagctctcctggatccatatca
cctggcgggtcaacaccattaggaatcggtttgagttctgtggttcaatctcaaaccgaa
ggtccagaaggtgcgaatctgtttatctataacatacctcgtgaatatggggatcaagaa
ctcgctgctgcgtttcaaccttacggtatggttctgagcgctaaggtgtttgtagacaaa
gccactggtgtaagcaaatgttttggttttgttagttatgactcacaagcagctgctcag
aacgctattaacatgatgaacggtcgccatttaggcggtaagaaattgaaagtccagctt
aagagagacgacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaac
ggccaacagagtagttaa
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