Brassica napus (rape): 106430223
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Entry
106430223 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Pathway
bna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106430223
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106430223
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106430223
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106430223
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106430223
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106430223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
106430223
NCBI-ProteinID:
XP_013726442
UniProt:
A0A816TY93
LinkDB
All DBs
Position
C8:complement(1324493..1328143)
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AA seq
934 aa
AA seq
DB search
MGKKAKKKSRTPTKENLSKKVSEQPSETGEITEGGSVQAVKEKQACVHFDKGLNLDKLLE
KIKSSRQIKCQECKEGVHGKRGAKEKGNKGKHAFSSSAADPKADKKAIWVCLECGAFVCG
GVGLPTGAQSHVVRHIRVTRHRLMIQWENPQLRWCFPCQSLLPVEKEDNGEKKDVLLEVV
KLMKERSLNSLAPSEAEEESSGSGSITSDIKLQGDVTTSGMGYVVRGLVNLGNTCFFNSI
MQNLLSLDQLRDHFLKEDASGIGGTLACSLKKLFAETKPEAGLKSVINPRVFFGSFCVKA
PQFRGYDQHDSHELLRCLLDSLSTEESALRKKRGVSDNDEKSTTLIESVFGGETSSIVSC
MECGHSSKVYEPFLDLSLPVPFKKTPPKKQPTVSLAKKAKLPPKRVAKHVSKVSKVSKVL
PSKALLDPKSPGKGAVVPADPDASSSSFAPVDNGTVSDNKQGSESVTQSDSVFDNFWLDV
IGPEPFGDETNVDTEDSVSDKITTTEANQILPGPDNSSNTSTLEGNTERLMQDNDEIIKA
ETFLDDKDEQATQHDEGTATSGVSTEINQASFIGCDPGLGESSSSVNPWDEEELPLMVAD
SQVLYMPYKENISYDDKPAVEEGEGEASSSSFVAGDHEPPQDNDFVGLGGLFDEPEVTEG
PVVFGPPCNPEASSGGAGFMAFSSESDPEEIDDSDSPVSVERCLAHFTKPEILSDDNAWN
CENCSKNLKLQRLKEKRKSKKDESRSSNTSNGWVSENEDVSAMKQDPSDGSSSVKDNGKE
AMSSNSANDSESEDESEEDSEKVITVKRDATKRVLVNKAPPVLSIHLKRFSQDLRGRLSK
LNGHVAFKEVIDLRQYMDSRCSGEDSPVYRLAGLVEHSGTMRGGHYVAYVRGGQKGKESV
WYNISDAHVRQVSLDKVMHSEAYILFYERIFTQD
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaagcgaagaagaagtcccgaaccccaactaaggagaatctctccaagaag
gtctctgagcagcctagcgagaccggggaaataactgagggaggttcagttcaagcagtt
aaggagaaacaagcttgtgtgcatttcgataagggtcttaatttggataaactgttggag
aagattaagtcttcccggcagattaagtgtcaagaatgcaaggaaggggtgcacggtaag
agaggagctaaggaaaagggtaataaggggaaacatgctttttcttcttctgctgctgac
ccaaaagctgacaagaaggctatttgggtttgtttggagtgtggggcttttgtttgtgga
ggtgttggtttacccactggagcgcagagtcatgttgtgaggcatatcagagtgactcgc
caccggttgatgattcagtgggaaaaccctcagttaaggtggtgttttccgtgccagtcg
cttctccctgtcgaaaaagaagacaacggtgagaagaaagatgtgttgctggaggttgtg
aaactgatgaaagagcggtctttgaacagtttagctccatctgaggctgaagaggagagc
tcaggaagtggcagtatcactagtgacatcaaattacaaggtgatgtcaccaccagtggt
atgggttacgttgtgcgagggttagttaaccttgggaacacatgtttctttaattcgata
atgcagaatcttctttccttggatcagttacgcgatcacttcttgaaggaggatgcgtct
ggtatcggtgggactcttgcttgttccctgaagaaattatttgcggaaacgaaaccagaa
gcaggcttaaagagtgtgataaaccccagagtcttttttgggtctttctgcgttaaggcg
ccacagtttagaggatacgaccagcatgacagccacgagctgctacgctgtttgctagat
tccttgagcaccgaagaatcagccttgagaaagaagcgtggtgtttctgataacgatgag
aaatctactactctcattgaatctgtgtttggaggcgaaacgtcgagcattgtttcttgt
atggagtgcggtcactcctcaaaagtctatgagccgttcttggatctttctttaccagta
ccgttcaagaaaacacctcctaagaagcaaccaaccgtttctctagcaaagaaagctaag
cttccaccaaagagagtcgctaagcatgtgtccaaagtaagtaaagtgtcgaaagtcctc
ccaagtaaggctctgttggatccgaaatctccgggaaaaggtgcggttgtcccagctgat
ccggatgcttcctcttccagttttgcgccagttgataatggtacggtttcagataacaag
cagggctcggaaagtgtaacgcagagtgatagtgtttttgataacttctggttggatgtt
attggaccagaaccctttggagatgagacgaatgtggatacggaagatagtgtcagtgac
aaaatcacaactactgaggctaatcaaattcttccaggtccagataattcttccaacacc
tcaactttggaaggtaacacagagaggctgatgcaagataatgacgagattataaaggca
gaaaccttcttggatgataaagatgaacaagctacgcagcatgatgaaggcacagctaca
agcggtgtttctactgaaatcaatcaagctagtttcattggttgtgatcctggtttaggg
gaaagttcatcctcggtgaatccttgggatgaggaagagcttcctttgatggttgcagat
tcgcaagttctgtacatgccgtacaaagaaaacatatcctatgatgataaaccagctgtg
gaagaaggcgagggtgaggcatcatcatcttcatttgtggctggtgatcatgagccacca
caagacaatgattttgttggtttagggggtttatttgatgagcctgaggttaccgaaggg
cctgttgtttttggacctccttgcaatcctgaagcttcttcgggaggagctggttttatg
gcgttcagcagcgagtctgatcctgaagaaatagatgattcggattcgccggtgtctgta
gagaggtgcttggctcatttcactaagcctgagattttgtctgacgacaacgcttggaac
tgcgagaactgttcaaagaacctgaagctccaacggttgaaggaaaagaggaaatccaag
aaagatgaatcgagatcaagcaacaccagcaacggatgggtgagtgaaaatgaagatgtt
tcagcaatgaagcaagatccaagtgatggttctagtagtgtcaaggataatgggaaagaa
gctatgagttctaactcagctaatgacagtgaaagtgaagatgaaagcgaagaagattcc
gagaaagtgataacagtgaaaagagatgcaactaaaagagtacttgtgaacaaagctcca
cctgtcttaagcatacatctaaagcgattcagccaagacctgcgtgggaggctaagtaag
ttaaatggtcatgttgctttcaaagaagtcatcgatcttcgacagtatatggactcaagg
tgtagtggagaagactcgccagtctatagattggctggactggtggagcattcagggacg
atgagaggaggtcactatgtggcgtatgttagaggaggtcagaaaggtaaagagagtgtg
tggtataacataagcgatgcacatgtccgtcaggtttcgttggacaaggttatgcattca
gaagcgtatatcttgttctacgaacggatcttcacacaagactaa
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