KEGG   Brassica napus (rape): 106430390
Entry
106430390         CDS       T04128                                 
Name
(RefSeq) splicing factor U2af large subunit B isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
bna  Brassica napus (rape)
Pathway
bna03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106430390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bna03041]
    106430390
Spliceosome [BR:bna03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106430390
 Complex B
    106430390
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 106430390
NCBI-ProteinID: XP_013726625
UniProt: A0A816RMR7
LinkDB
Position
C1:32921766..32925530
AA seq 579 aa
MNYEGNGDSVTVATDDNNDNENYIARESSPFKSLGSEDSKSRDSHVLDKDSSRSREKDKA
KGRDKDRDRDREKSRDRDRERDRHRRDRHRDRSRERNEKRERERDDLDDDDDDDHYRSRH
RHRSSRDRDREERHMRRSRSRSRSRSERRSRSEHRRRSEHRSRSRSRSRSKSKRVSGFDM
APPASAMLAATAVAAAAGQVPSVPATASIPGMFPNMLAMVPGQQMGALPLLPMQAMTQQA
TRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGLGDAVVNVYINHEKKFAFVEMR
SVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAALGPSQPNPSLNLAAVGLSSGSTGG
LEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVFQDPSVTD
IACAALNGIKMGDKTLTVRRAVQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGSTPTKIV
CLTQVVTADDLGDDEEYEDIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYA
DVDGAAKARSGMNGRKFGGNQVVAVYYPENKFAQGDYEG
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgaattacgaaggtaacggagatagtgtcactgtcgccaccgatgacaataacgacaac
gagaactacatagctagggagagctcgccattcaagtctcttggtagcgaggactccaag
tctcgagattctcatgttctggataaggattcttcaagaagcagggagaaggacaaggca
aaggggcgtgataaagacagggacagggacagggagaagagcagggacagagatagggaa
cgcgatcgccatcgtagagatcgtcatagggaccgtagcagagaacgtaatgagaaaagg
gaacgtgagagagatgatctcgatgatgatgatgacgatgatcattacagaagtcgacac
cgtcacaggagctctcgcgatcgagatagagaggagagacacatgcgacgctcacgctct
cgctccaggagccgctctgaacgtaggtcaagatccgagcataggcgtaggtctgaacat
agatcacgttcacgctcacgctcacggtccaagagcaagagggtaagtggattcgatatg
gcgccccctgcttctgcaatgctagctgctactgctgttgctgccgcagcaggccaggtt
cctagtgtgccagctactgctagtattccagggatgttccccaacatgcttgcaatggtc
cctggtcagcaaatgggagcgcttcctttactgccaatgcaggcaatgactcagcaggca
actaggcatgctcgacgagtttatgttggtggccttccacccactgcaaatgaacagtcg
gttgcaactttctttagccaagtgatgtcggcgattgggggaaacactgctgggctaggc
gatgcggtggtcaatgtttacataaaccatgaaaagaagttcgcttttgtggagatgaga
tctgttgaggaggctagtaatgcaatggcactagacggaattatattagagggggttcct
gtaaaggtgaggaggccaactgactataacccgtcgcttgctgcagctcttggcccgagc
cagccgaatcccagtctcaatttggcggctgttggattgtcttcggggtctaccggtggg
cttgagggtccggaccgcatttttgttggtgggcttccttattacttcacagaagaacag
atcagggagctcttggagtcttttgggcccctgagaggttttaacttggttaaagacagg
gaaactggaaactcgaagggatatgctttttgtgttttccaagatccttcagtgacagat
attgcttgtgccgctctaaacgggattaagatgggtgataagacacttacagtgaggcgt
gcagtccagggtgtgattcaacctaaacctgagcaagaggaagtattacttcatgctcaa
cagcagattgctttgcagaggcttatgctacaaccgggaagcacgccaaccaagattgta
tgtttgactcaagtggttacagctgatgatcttggagacgatgaagaatatgaagacata
atggaggacatgagacaagaaggtggaaaattcggtaacttggtgaatgttgtgattccg
aggcccaatcctgatcatgatccaacaccaggagttggaaaggttttcttagagtatgcg
gatgtagatggcgcagcaaaggccagatcgggaatgaacggaagaaaatttggaggaaac
caagtggttgctgtgtattaccccgagaacaagtttgcacaaggcgactacgaaggctga

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