Brassica napus (rape): 106430559
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Entry
106430559 CDS
T04128
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
bna
Brassica napus (rape)
Pathway
bna04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
106430559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106430559
Transcription factors [BR:
bna03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106430559
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Pox_Ag35
CDC45
PBP1_TM
DUF5427
RR_TM4-6
Zip
Motif
Other DBs
NCBI-GeneID:
106430559
NCBI-ProteinID:
XP_013726806
UniProt:
A0A078FND9
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Position
A10:complement(8573912..8577071)
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AA seq
355 aa
AA seq
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MQETILDFLEECEFVDTSLAGDDLFAILESLEGAGEISSTAASTPKDGTTSSKELVKNQN
HETSSPKKKRKRLETGKEEEDDDDGEGEEEEEDDEDNKQDGQQKMSHVNVERNRRKQMNE
HLIVLRSLMPCFYVKRGDQASIIGGVVEYINELQQVLQSLEAKKQRKTYAEVLSPRLVPS
PRPSPNVLSPRKPPLSPRISHHHLLLPPISPRTPLPTSPYGAHPPQLPLIPQPPRSYCLG
DPPPYSPASSSSSPSVSSNHESSLINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQ
VMKIIAALEDLSLEILQVNINTVEETMLYSFTIKIGVECQLSAEELAQQIQQTFC
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagacaatactggattttcttgaagaatgtgaattcgtggacacttcactagcc
ggagatgatctgtttgctatcttagagagtcttgaaggcgccggagagatatcttccact
gctgcatctacacctaaagatggaaccacaagttccaaagagttagtaaagaatcaaaac
catgaaacttcatctcctaaaaagaagaggaaaagactagaaactgggaaagaagaagaa
gacgacgacgatggagaaggagaagaagaagaagaagatgatgaagataataagcaagat
gggcaacaaaagatgtctcatgtaaacgtggaacgtaatagaagaaagcaaatgaacgag
catttgatcgttttacgttctcttatgccttgtttctacgtcaagcggggggaccaagca
tcgattataggtggagttgtggaatacataaacgagctacagcaagttcttcaatcctta
gaagccaagaaacaacgtaagacctacgcggaagtcctaagcccgagactagtcccaagc
cctcgtccttcaccaaatgttctaagcccgcgaaaaccgcctcttagccctcgtatcagc
caccatcatctccttctccctcccataagccctcgaacccctctgcccacaagcccatac
ggagcccatcctccgcaactaccactcatcccacagcctcctcgttcttactgcttaggg
gacccacctccatactccccagcttcatcttcttcttctccttcagtcagtagtaaccat
gagagtagtttaataaatgagcttgttgctaactcaaagtcagctttggctgacgtggaa
gtgaagttctcaggagctaatgtgctgctcaaaacggtatcgcataagatcccaggacag
gttatgaagataatcgctgctcttgaggatttgtctctcgagattcttcaggttaacatt
aacaccgtcgaagaaaccatgctttactctttcaccatcaagattggagttgagtgccaa
ctaagtgcagaagaattggctcaacaaattcagcaaacattctgctaa
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