Brassica napus (rape): 106430932
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Entry
106430932 CDS
T04128
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bna
Brassica napus (rape)
Pathway
bna00300
Lysine biosynthesis
bna00470
D-Amino acid metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01230
Biosynthesis of amino acids
Module
bna_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
106430932
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
106430932
Enzymes [BR:
bna01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
106430932
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
106430932
NCBI-ProteinID:
XP_013727180
UniProt:
I7D138
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All DBs
Position
A10:16547113..16549348
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AA seq
486 aa
AA seq
DB search
MASATQLLSQPPSLRGNLNRYQSSLPRISVLSLKSTSKPLNRLSVKAAAAASQNSVITPT
KDAAFEHCFKKSSDGFLYCEGTKVEEIMESVERRPFYLYSKPQITRNVEAYKEALEGVSS
VIGYAIKANNNLKILEHLRSKGCGAVLVSGNELRLALIAGFDPTKCIFNGNGKLLEDLVL
AAQEGVFVNVDSEFDLENIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIR
NEKLQWFLDEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRRQGFEVSY
LNIGGGLGIDYYHAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTG
VKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPPAPEAEVSKFDVVGPVCESADFLG
KDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSITKIRHAETFEDHL
RFFNGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctactcagctcctctcccaacctccatctctccgcggaaacctaaaccga
taccaatcctccctcccaagaatctcggttctgtctctcaagtccacctcgaaaccactt
aaccgcctctccgtcaaagccgccgccgccgcatcccaaaactcggtgataaccccaacg
aaggatgctgcgttcgagcactgtttcaagaagtcctcagatgggttcctctactgcgag
ggaactaaggttgaagagatcatggagagcgtcgagagaagacctttctacttgtacagc
aagcctcagatcacgaggaacgtcgaggcgtacaaagaggccttggaaggtgtgagttcc
gtcattggctatgctattaaagccaataacaacctcaagattctggagcatttgaggagt
aaaggctgtggtgctgtgctagttagtgggaacgagctcaggcttgctcttattgctggc
ttcgatcccacaaagtgtattttcaatggaaacgggaagctgttggaggatttagtttta
gctgctcaagaaggagtttttgtaaacgttgatagtgagtttgacttggagaatattgtg
gaagcttcgagaatctctggtaagcaggtcaatgttctgctgcgtatcaatcctgatgtg
gatcctcaggtgcatccatatgtagccaccgggaacaagaactcaaagtttggtatcagg
aacgagaagcttcagtggtttctcgatgaggtgaaggcacatcccaatgagctcaagctt
gttggagctcattgccatcttggctccaccattacaaaggtggatatattcagagatgct
gcggttctcatggtggagtacattgatgaaatcaggcgtcagggatttgaagttagttac
ttgaacattggtggtggtttagggattgattattaccatgccggtgctgtacttcctaca
cctatggatctcattaacaccgtaagagagcttgttctgtcacgagacttgaatctaata
atcgagccagggaggtcgttgatagcaaacacgtgctgtttcgtcaaccatgtgacaggt
gtgaagacgaatggaactaaaaactttatagtgatcgatgggagtatggctgagcttatc
cgtcccagtctttatgatgcctatcagcacattgagttggtctctcctccagcacctgaa
gcagaggtttccaaattcgacgtagtgggtcctgtttgtgaatctgctgatttcttgggc
aaagacagagagcttcccactcctccaaagggagctggtctagtggttcatgatgctggt
gcgtattgtatgagcatggcttccacttacaatctcaaaatgcgtcctccggaatactgg
gttgaagatgatggttctatcactaagatcaggcatgctgagacattcgaagaccatttg
cgtttcttcaacggtctatag
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