KEGG   Brassica napus (rape): 106431075
Entry
106431075         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 5B
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
bna03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106431075
  09124 Replication and repair
   03420 Nucleotide excision repair
    106431075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106431075
   03400 DNA repair and recombination proteins [BR:bna03400]
    106431075
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     106431075
  RNA polymerase III system
   RNA polymerase III
     106431075
  RNA polymerase I system
   RNA polymerase I
     106431075
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106431075
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N CHB_HEX
Other DBs
NCBI-GeneID: 106431075
NCBI-ProteinID: XP_013727336
UniProt: A0A817AYB8
LinkDB
Position
A4:20233652..20235577
AA seq 223 aa
MEGKGKELAVGSGLSKSLDESRVDSHSYYLARRTTMEMLRDRGYDISNEDINLTLQEFRS
LYGDPPNVDRLRISAQHCSDSSKKIAVVFCGSGIVKVNAIREIAADVLGRENLTGLILVL
QSDITNQALKAVELFSFKVELFHLTELLVNITKHVLRPKHRVLNDQGKESLFKKFSIEEQ
QLPKLLKKDPTAKYYGLEKGQVVEVTYKGEGSESDHVLYRCVW
NT seq 672 nt   +upstreamnt  +downstreamnt
atggaggggaaaggtaaggagttagcggttggctctggtctgagcaagtcccttgatgaa
tcacgtgtggacagtcacagctattacctggcgcgtcgaaccaccatggagatgctccga
gacagaggatacgatatctcaaatgaagacattaacctcactttacaggagtttcgatcg
ctctacggcgaccctcccaacgttgatagactccgtatctcagcacaacattgttctgat
tcttcaaaaaagatagctgttgtgttttgcggaagtggtatagttaaagtcaatgcgata
cgcgaaatagcagccgatgtacttggtcgagaaaatttaaccggactgatattggttctc
caaagtgatataacaaatcaagctctaaaagccgttgaacttttctccttcaaagtcgag
ttattccatttaaccgaattgctggttaacataaccaaacatgtcttgaggccaaaacat
cgggttctgaatgatcaagggaaggaatcactcttcaagaagttcagtattgaggagcaa
caacttccaaagttattgaagaaagacccgacagcgaaatactacggactagagaaaggg
caagtcgtggaggtcacatacaagggcgagggcagtgagtctgatcatgttttataccga
tgcgtttggtaa

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