Brassica napus (rape): 106431077
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Entry
106431077 CDS
T04128
Name
(RefSeq) autophagy-related protein 18c
KO
K22991
WD repeat-containing protein 45
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106431077
Membrane trafficking [BR:
bna04131
]
Autophagy
Other autophagy associated proteins
Others
106431077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_IFT140_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
106431077
NCBI-ProteinID:
XP_013727339
UniProt:
A0A817AY97
LinkDB
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Position
A4:20104655..20107303
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AA seq
408 aa
AA seq
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MSSTASSPQRVLQPGGYNGNDSRSSSTSSSFLRPELESTETEEAELVSVSWNQDSSCFAA
GTSHGFRIYNCEPFKETFRRDLKNGGFKIVEMLFRSNILALVGGGPNSQYPSTKVLIWDD
HQSRCISEFSFRSEIRAVKLSRDWIVVVLEHKIYVYSFVDLRLLLQIETYANPRGLCCLS
HDSDTSVLACPGLLRGEIRVEHFGLNMVQTINAHDASIACMTLTLDGLLLATASTKGTLI
RIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVVGEDSQS
SENAALLTQGTYSNSLQGLVSPPTGTNPGSSLSFMRGVLPKYFSSEWSFAQFHVSEVTQF
FAAFGSHNTVAITGMDGSFYRCSFDPVNGGEMVQLEHIHFLKTDNRPR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaactgcttcaagtccccaaagagtcctgcaaccaggtggttataatggtaat
gactctcgaagtagcagcacttctagttcctttctgcgtccagagttagaatcaactgaa
accgaagaagcagagctagtttctgtgtcttggaaccaggactccagttgtttcgctgct
ggaacaagtcatggtttccgcatatacaactgtgagcctttcaaagaaactttcagacgc
gacctgaagaacggtggtttcaaaatcgttgagatgcttttccggagcaacatcttggcc
cttgttggcggtggacctaactctcagtacccttcgaccaaagtactgatctgggatgat
caccagagccgctgcatcagtgaattttcttttaggtctgagattcgtgcggtgaagtta
agtagggattggattgttgttgttcttgagcataagatatatgtctacagtttcgtggac
ctgagacttcttcttcagattgaaacgtatgcaaatccgagaggattgtgctgcctttct
catgactcggatacatctgtgctggcttgccctggtttacttcgaggagagattcgagtt
gaacattttgggcttaacatggtgcaaaccataaatgcacatgacgccagtattgcgtgc
atgaccttgacgcttgatggtctgttgctggcaactgctagtacaaaggggacactgatt
agaatcttcaacacaatggacggaactcgtttgcaagaggtaagaagaggagtggacaga
gcagatatttatagcattgcactttcaccaaacgtgcagtggctggcagtatcaagcgac
aaggggactgttcatattttctctcttagagttagggtagttggggaggattctcaatcc
agtgaaaatgcagctctcctgacacaaggaacttattctaattctctgcaaggccttgtt
tctccacccactggtaccaatcctggttcctctctgtcatttatgagaggtgttctacca
aagtatttcagctcggagtggtcatttgcacagttccatgtatcagaagtcacacaattc
ttcgctgcatttggcagtcacaacacagttgctatcaccggcatggatggaagtttctac
agatgcagctttgatcctgtgaatgggggagagatggtgcagcttgaacatatccacttt
ctaaagactgataaccgcccaagatag
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