Brassica napus (rape): 106431435
Help
Entry
106431435 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: ISWI chromatin-remodeling complex ATPase CHR17
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106431435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106431435
03036 Chromosome and associated proteins [BR:
bna03036
]
106431435
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
106431435
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
106431435
RSF complex
106431435
WICH complex
106431435
B-WICH complex
106431435
NORC complex
106431435
BRF complex
106431435
NuRF complex (fruit fly)
106431435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HDA2-3
Myb_DNA-binding
HAND
CHDII_SANT-like
PIN
Spectrin
Motif
Other DBs
NCBI-GeneID:
106431435
NCBI-ProteinID:
XP_048609816
LinkDB
All DBs
Position
A2:complement(2746625..2751633)
Genome browser
AA seq
862 aa
AA seq
DB search
MYENGINGILGLGKTLQTISLLAYLHEYRGINGPHMIVTPKSTIGNWMNEIRRFCPVLRA
VKFLGDPEERRYIREELLVAGKFDVCVTSFEMAIKEKTTLRRFSWRYIIIDEANRINNEN
SLLSKTMRIFNTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDDWFQISGENDQ
QEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNG
GGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLIPKLKERD
SRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLST
RAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIE
RAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKG
EEATAELDAKMKKFTEDAIQFKMDDNAELYDFDDDNKDENKFDFKKIVSENWNDPPKRER
KRNYSEAEYFKQTLRPGAPAKPKDPKIPRIRMPQLHDFQFFNLERLTGMYEKEVRHLMQI
HQKTQVKDTVEVDEPEEVGDPLTAEEVEEKEQLLEEGFSTWSKRDFNTFIRSCEKYGRND
IKSIASEMEGKTEEEVERYAQVFKDRYKELSDYDRIIKNIEKGEGRISRKYEIMKAIGKK
LDRYTNPWLELKIQYGQNKGKLYNEECDRFMVCMVHKLGYGNWEELKTAFKTSPLFSFDW
YVKSRSVQELARRCETLVRLIEKENQEYDERERRARKEKKLATNGTPSKRALGREAIESP
TFLKKRKQLSMDDFVTSGKRRK
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaatggcataaatggaattctgggtctggggaagacacttcaaacaatttct
ttgctggcttacctgcatgaatacaggggaattaatggtcctcatatgatagttactcca
aaatcaaccattggtaactggatgaatgaaattcgccgattttgtcccgtcctgcgtgct
gtgaaattccttggtgatcctgaggaaaggagatatattcgtgaagaactgctagttgca
gggaaattcgatgtttgtgttacaagctttgagatggctatcaaagagaagacaaccttg
cgacgctttagctggcgttatataatcattgatgaagcaaatcgaatcaataatgagaat
tcccttctttcaaaaaccatgagaatttttaacaccaattatcggcttcttatcacagga
acccctcttcagaataatcttcatgaactgtgggctcttctcaattttcttctccccgag
gtttttagttcagcagagacttttgatgactggtttcaaatttctggtgaaaatgaccag
caagaagttgttcaacaacttcataaggttcttcgaccatttcttcttcggaggttaaaa
tctgatgtagaaaaaggcttacctccaaaaaaggagacgatactcaaagttggcatgtct
cagatgcaaaaacagtactacaaggcgttactgcagaaggatcttgaagtggtcaatggt
ggtggagaacgcaaacgtctgttgaacatagcaatgcaattgcgcaaatgctgcaaccac
ccttatctcttccagggtgcagagccgggtcccccctataccacaggagaccaccttgta
acaaatgcaggtaagatggttctcttagacaagttgatacctaagttgaaggaacgcgat
tcaagggttctgatattttctcagatgacaaggcttttggatattctcgaggattattta
atgtatcgtggttaccagtattgccgtattgatggaaacactggtggtgacgaacgagat
gcttccattgaagcctacaacaagccaggaagtgagaagtttgttttcttattatccact
agagctggagggcttggtatcaatcttgctactgcagatattgtgatcctttatgacagt
gactggaatccccaagttgacttgcaagctcaagatcgtgcacataggattggtcaaaag
aaagaagttcaagtattccggttctgcacagagaatgctattgaggcaaaggtgattgag
agagcttacaagaagctggcacttgacgctctggtaattcagcaagggcgattggcagaa
cagaaaactgttaataaggatgagttactccaaatggttagatatggtgctgaaatggtg
tttagttctaaagatagcacaattacggatgaggatattgacagaatcattgccaaagga
gaagaggcaactgctgaacttgatgcgaagatgaagaaattcactgaagatgcaatacag
tttaaaatggatgacaatgctgagctttatgatttcgacgatgataataaggatgagaac
aagtttgattttaagaagattgtaagtgagaattggaatgatccaccaaagcgagagaga
aagcgcaactactctgaagctgaatacttcaagcaaacattgcgaccaggtgctccagct
aaacctaaagatcctaaaattccacgcatccgcatgccccagttgcatgatttccagttc
tttaacctggagagactgaccgggatgtatgaaaaggaagtgcgacaccttatgcaaata
catcagaaaactcaggtgaaagacacagttgaagttgatgaacctgaagaagttggagat
cccttaactgccgaggaagtggaagaaaaggagcaattgttggaagagggtttctcaaca
tggagcaaaagagacttcaataccttcattagatcatgtgagaagtatggccggaacgat
ataaagagtattgcctctgagatggaagggaaaacagaggaagaggttgaaagatatgct
caagttttcaaagaccgatacaaggagctgagtgattacgatagaatcatcaagaatatt
gagaaaggggaagggagaatctctaggaaatatgaaatcatgaaagctattgggaagaaa
ctggatcgctacacgaacccgtggctggaactgaagattcagtatggtcagaacaaaggg
aagctgtacaatgaagagtgtgaccgtttcatggtatgcatggtccataagcttgggtat
ggaaactgggaagaactaaagactgcttttaagacatccccattgttcagcttcgactgg
tacgtaaaatcccgttcagttcaggaacttgccaggagatgcgaaacactggtccggctg
atagagaaagagaaccaagagtatgatgagagagagaggcgagcccgtaaagagaagaag
cttgcaacgaatggaacaccttcaaagcgagctttgggtagggaagcaatagagagccct
actttcttgaagaaacgaaagcagctgtcaatggatgattttgtaacctcgggaaaacgt
aggaaataa
DBGET
integrated database retrieval system
