Brassica napus (rape): 106431542
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Entry
106431542 CDS
T04128
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5 isoform X1
KO
K25871
zinc finger protein IDD14/15/16
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bna03000
]
106431542
Transcription factors [BR:
bna03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106431542
BRITE hierarchy
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
106431542
NCBI-ProteinID:
XP_013727791
UniProt:
A0A078FSX3
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Position
A6:complement(26333862..26337148)
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AA seq
444 aa
AA seq
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MKTDQGAVVMLDDAASKKNTANTRCVVFSSSDPLLSSSENGVTTTKTSIQKRKRRPAGTP
DPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKR
VYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTC
GTRGHSCDCGRVFSRVESFIEHQDNCSVRNVHHEPPPPPQTAVIVTACSSRTASTASTPS
SETNYGGAVTVATPLPLEGRPIHIRSSSLTPLLLTNSSNLNLELQLLPSTPNLNPNQENQ
QHKVKEPSLHHHHHHHNHDTTNLNLSIAPSSSSYHHYNNFDRIKELMASEEIMKEKAYAE
EAKREAKRQREIAENEFANAKKIRQQAQTELKRAKLLKEQSMKKISSTLMQVTCQTCKGQ
FQATEETSLVVSYMSSANTDGEGS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagatcaaggagcagtggtgatgttggatgatgctgcttccaagaagaacact
gctaacacacgttgtgtggttttttcttcttctgatcctttactctcttcttcagaaaat
ggggtcaccaccacaaagacatccattcaaaagaggaaaagaagacctgcaggaacacca
gatccagatgcagaagttgtgtcactatcaccaagaactcttcttgaatcagatagatac
atatgtgagatctgtaaccaagggtttcaaagagatcaaaatctccagatgcatcgaaga
cgtcacaaggttccatggaagcttctgaagagagacaacaacatagaggtgaagaaacga
gtctatgtttgccctgaacccagttgtcttcaccatgatccttgtcatgctcttggagat
cttgtcggaataaaaaaacatttcagacgaaaacacagcaaccataagcaatgggtttgt
gagaaatgctctaaaggttatgctgttcaatcagattacaaagctcatctcaaaacttgt
ggcactagaggccattcttgtgactgtggtcgtgtcttctccagggtggagagttttatt
gaacatcaagataactgttccgtacggaatgttcaccatgaaccgccgccaccgccacaa
accgccgtcattgtcaccgcctgctcctctagaaccgcctcaactgcaagcactccatct
agcgaaacgaattacggtggtgcggttacagttgcgactcctctacctctagaaggacgt
ccaattcatatcagaagctcatctttaacgcctttacttctcaccaattcatcaaatctc
aaccttgaacttcagcttcttccatcgacgccaaatctaaaccctaatcaagaaaaccaa
caacacaaagttaaagaaccatctcttcatcatcatcatcatcatcataatcatgatacc
acaaacttaaacctctccattgctccatcatcatcatcctatcatcattacaacaacttt
gatcgcataaaagaactaatggcgagtgaagagatcatgaaggagaaagcgtacgcggag
gaagctaaaagagaagcgaagagacagcgagagatagcggaaaatgagtttgcgaatgcg
aagaagataaggcaacaagcacaaactgagcttaagagagctaagcttttaaaggaacaa
tctatgaagaagataagctcaacgcttatgcaagttacttgtcaaacttgtaaaggacag
tttcaagcgacggaagagacatctcttgtggtgagttacatgtcgtcagcgaatactgac
ggagagggatcatag
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