KEGG   Brassica napus (rape): 106431562
Entry
106431562         CDS       T04128                                 
Name
(RefSeq) RING-H2 finger protein ATL40-like
  KO
K19038  E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106431562
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106431562
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    106431562
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_UBOX zf-RING_16 Prok-RING_4 zf-RING_4 zf-RING_10 Zn_ribbon_IFT122_C PHD_NSD zf-RING-like SLX1_C zf-C3HC4_4 zf-RING_6 PHD Lysis_col RINGv Prok-RING_1 zinc_ribbon_16
Other DBs
NCBI-GeneID: 106431562
NCBI-ProteinID: XP_013727808
LinkDB
Position
C4:2862572..2864523
AA seq 217 aa
MSSDNINNDHGTDPDFWQNAASYHGSSKILIVIILVFSIFILVVCAYHLYPRFVLRGGRR
STFQGHSLTLVTQPPKHGLDIVVIDSLPTFVVGVNGDHDVSATTECAVCLALLEEKDTAR
MLPNCKHVFHVTCVDTWLATHSTCPICRTDVEPSHRLEPEPREGPVGDGASSSDYKSGGS
TVVRLDSFRRILTRERSSDRNDHSRVDQDRVLDLERQ
NT seq 654 nt   +upstreamnt  +downstreamnt
atgagctctgacaacataaataatgatcacggaaccgatcccgacttctggcaaaacgcg
gcttcttaccatggcagcagcaagattttaattgtcatcatccttgttttctctattttc
atcctcgtagtctgcgcttatcatctatacccaagattcgttctccgcggcggccgtaga
tccaccttccaaggccactctctcacccttgttactcagccgcccaaacatggcctcgac
atagttgtcattgattctcttcctacattcgtggttggagtcaacggtgatcatgacgtc
tcggcgacgacggaatgtgcggtgtgtctagccttgttggaagagaaagatacggcgagg
atgttaccgaactgcaaacacgttttccacgtgacatgcgttgacacatggctcgcaacg
cactccacttgtcccatttgtagaactgatgtcgagccgagtcatagacttgagcctgag
ccaagagaagggccagttggtgatggtgcatcttcgtcggattacaagagtggcgggtca
acggttgtgcggttagattcgtttcggaggattttgacaagggaaagatcttcggacagg
aacgatcattctcgcgttgaccaagatcgtgtattagatcttgaaagacaatga

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