Brassica napus (rape): 106432160
Help
Entry
106432160 CDS
T04128
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bna01009
]
106432160
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106432160
Enzymes [BR:
bna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
106432160
Protein phosphatases and associated proteins [BR:
bna01009
]
HAD phosphatases
Fcp/Scp phosphatases
106432160
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106432160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
106432160
NCBI-ProteinID:
XP_013728461
UniProt:
A0A816IKJ6
A0A817A216
LinkDB
All DBs
Position
A8:complement(12230672..12235381)
Genome browser
AA seq
847 aa
AA seq
DB search
MYNNSNRVQVYLEDGRVGEMEICPPRESHQEDHVMKQRRVMEKVKMGMGIRISRFSQPSE
RCPPLAVLATVSSCGLCFKLEASPSPAQEQLSLLYSSCLRGNKTAVMSLGEEELHLVAMY
AENINNDRPCFWAFTVAPGIYDSCLVMLNLRCLGIVFDLDETLVVANTTRTFEDKIEGLQ
RRINNEGDPQRIAAMVAEMKRYQDDRNLLKQYIESDQVIDNGEVVKVQSELVPALSENHQ
PLVRPLIRLPEKNIILTRINPMIRDTSVLVRMRPSWEELRSYLTAKGRKRFEVYVCTMAE
RDYALEMWRLLDPEGNLINASDLLARIVCVKSGFKKSLVNVFPDATCHPKMAMVIDDRLK
VWEEKDQPRVYVVPAFVPYYSPQAEAAATPVLCVTRNVACRVRGGFFRDFDDSLLQRIAE
ISYENDVEDIPSPPDVSHYLVPEDETSGLNENKDPLSLDGMAEVERRLKEAISVVLPAAN
IDPRIAAPVQYPMASVSVSAPVPVAVPVVQQAPQPSAMAFPSIQFQQPISIAKLLVPSEP
SLQSSPAREEGEVPESELDPDTRRRLLILQHGQDSRDAAPSEPPFPQRPPVQAPPPQAQP
RNGWFPVEDMDPATLRRTVSKEYPVDSERPRHQSDRMPHENRRLPKELRPNNNLPGSHPF
YGEEASWNQSSSRISDIGRSVSATENPAEALHEIAIKCGTKVDYRPGLVASTDLRFSVEA
WFSGKKVGEGIGKSRREALQKAAELSLQNLADIYLSVANGDAGPSHRDAIASPLANGNMI
MGGNANTFDNLPFARDETAMAVPSRSMLPLHKRQGSPRSFGGMSNKRLKPDFQRSSMQRM
PSSGRYS
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacagtaatagagtccaagtgtatcttgaagatggaagagttggggaaatg
gagatttgccctccaagggaatcacatcaagaagaccatgtgatgaagcagaggagagtg
atggagaaagtgaagatgggaatgggtatcagaatcagccgtttctctcaacctagcgag
agatgtcctcctcttgcagtgcttgctactgtttcatcttgtggcctttgtttcaagttg
gaagcttcaccttctcctgcccaggagcagctcagtctcctctactcgtcatgccttagg
ggcaacaagacggcagtaatgtctctaggtgaggaagagctgcatttggtagccatgtat
gctgagaacatcaacaacgaccgtccttgcttctgggcatttacagtagctcctgggatt
tatgattcatgtcttgtcatgctgaatctcagatgtctaggtattgtctttgatcttgat
gaaacccttgtggtggccaacaccacgcgcacgtttgaggataagattgaggggttgcag
cggaggataaacaacgagggggaccctcaacgcattgcggctatggtggctgagatgaag
cgttatcaagatgacaggaatctgttgaagcagtatattgaaagtgaccaggttattgat
aatggggaggtggttaaagtgcagtcagaacttgttcctgccttgtctgagaaccatcag
cctcttgtccgtccactgataaggctgccagagaagaatattatcctgactcgcattaat
cccatgattcgtgatacaagtgttcttgtgaggatgaggccttcatgggaggaacttcga
agctatttgacagcgaaagggcgcaagcgttttgaagtatatgtttgcacaatggctgag
agagactacgccttagagatgtggaggctccttgatccagaagggaatttgatcaacgca
agtgacttgctagctcgcattgtttgtgtaaaatctggttttaaaaaatcattggtcaac
gtgtttcctgatgcaacctgccatcctaagatggcaatggtaattgatgatcggctgaaa
gtttgggaagagaaggatcagccaagggtgtatgtggttcctgcattcgttccctactat
tctcctcaagctgaagctgctgctacaccggtactgtgtgttaccagaaatgttgcttgc
cgtgtcagaggtggatttttcagggattttgatgatagtctgctacaaaggattgctgaa
atatcttatgagaatgatgttgaggatattccatctccacctgatgtcagccattactta
gtgcctgaggacgaaacatctggtttgaatgagaacaaagatccactttccttggacggg
atggctgaagttgagagaagactgaaggaggcaatttcagttgtccttccggctgctaat
atagatccaaggatagctgctcccgttcagtaccctatggcttctgtttctgtttccgct
ccagtgccagtagcagtacctgtcgtgcaacaagcaccacaaccatcagcgatggccttt
ccaagtatccagtttcaacaacctatatcaatagctaaactcttggttccttcagaacca
agcttgcagagttctcctgctagagaggaaggcgaggtacctgaatcagagttagatcca
gatactaggaggaggctcctcatattgcagcatggacaagatagtagagatgctgctcca
agtgaacctccgtttcctcagagacctccagttcaagctccacctccacaggcgcagcca
agaaatggttggtttcctgttgaggacatggatccagctactcttcgccgaactgtctcc
aaagaatatccagtggattctgaaaggccacgccatcaatctgacaggatgcctcatgag
aatcgtagactaccaaaggagttacgtccaaacaacaatctaccaggctctcatcctttc
tatggggaagaggcatcttggaatcaatcttcttctaggatcagtgatattggacgaagt
gtctcagcaacagagaatccagctgaagctctacatgagattgctattaaatgtggaact
aaggtggactacagaccggggttggttgctagtacagatttgcggttctctgttgaggct
tggttctctggtaaaaaagtcggagaagggattggcaaatcgagacgagaagccctgcaa
aaggctgctgaactttctctccagaacttagctgatatatatttgtctgttgcaaatggt
gacgcagggccaagccacagggatgctattgctagccccttggctaatggcaatatgatt
atgggaggaaatgcaaatacgtttgataatctgccatttgccagagatgaaacagcgatg
gcagttccttctagatcaatgcttcctttgcataagcgacaaggatctccacgatcgttc
ggtgggatgtcaaacaagcgtctaaagccagactttcaaaggtcgtcgatgcaacggatg
ccatcttcaggaagatattcttaa
DBGET
integrated database retrieval system
