Brassica napus (rape): 106432392
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Entry
106432392 CDS
T04128
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bna
Brassica napus (rape)
Pathway
bna00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106432392
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bna01007
]
106432392
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106432392
Enzymes [BR:
bna01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
106432392
Amino acid related enzymes [BR:
bna01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106432392
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106432392
Prokaryotic type
106432392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
106432392
NCBI-ProteinID:
XP_013728675
LinkDB
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Position
A9:41614628..41620322
Genome browser
AA seq
1101 aa
AA seq
DB search
MSLLFLTRAKPLFLSRYLSSFLSPAPTNLLRRSFHGSATMSEAEKKILTEEELERKKKKD
DKAKEKELKKLKALEKAKLAELKAKQAKDGTSAPKKSAKKSSKRDASDENPADFVDPETP
LGDKKRLSSQMAKQYSPAAVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHI
GHALTSAIEDTIIRWKRMSGYNALWVPGMDHAGIATQVVVEKKLMRERGLTRHDVGREEF
VNEVWKWKNQHGGTILTQLRRLGASLDWSRECFTMDEQRSKAVTEGFVRLYKEGLIYRDI
RLVNWDCVLRTAVSDVEVEHIDIKEKTLLNVPGYDKPVEFGLLTSFAYPLEGGLGEVVVA
TTRVETMLGDTAIAIHPDDARYKHLHGKFAVHPFNGRKIPIICDGILVDPNFGTGCVKIT
PAHDPNDCEVGKRHNLEFINILADDGKINTNGGSDFTGMPRFAAREAVLEALNKKGLYRG
AQNNEMRLGLCQRTGDVIEPMIKPQWYVNCSMIGKEALDVAINDENKKLEFVPKQYTAEW
RRWLENIRDWCISRQLWWGHRIPAWYAALEEDERKEVGAYNDHWVVARTEEEARKEAAEK
FSGKKFELTQDQDVLDTWFSSGLFPLSVLGWPDETEDFKAFYPTSVLETGHDILFFWVAR
MVMMGMKLGGDVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLDALHKRLEEG
NLDPKELVVAKEGQVKDFPNGISECGADALRFALVSYTAQSDKINLDILRVVGYRQWCNK
LWNAVRFAMMRLGDDYSPPLTLTPETMPFSCQWILSVLNKAIAKTVESLNAFEFSDAANT
VYAWWQYQFCDVYIEAIKPYFAGDNPAFASERAHAQHALWVSLETGLRLLHPLMPFVTEE
LWQWLPSPKNTERKASIMICDYPSAIENWTNEKVETEMETVLASVKCLRALRAGLMEKQK
NERLPAFAVCENNVTSEIVKSHELEIRTLANLSSLEVLLKGEHAAPPGSAVETVNENLKV
YLKVNRAINTEAEQEKIRNKIDELQKQKEKLQKVMSASGYEEKVPANIKEDNATKLAKIL
QEFDFFEKENARLVAETGNEQ
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgctcttcctcacgagagccaagccgttatttctatctcgctatctctcctcc
ttcctctctccggcgcctaccaatctactacgtcgctcctttcacggctccgcaacaatg
tccgaagcagagaagaagatcctcacagaagaggagcttgagcgcaagaagaagaaggat
gacaaggctaaagaaaaggagttgaagaagctcaaagctttggagaaagcgaagcttgca
gaactgaaggcgaaacaggcgaaagatggaaccagtgcccctaaaaagagcgcaaagaag
agttccaaacgagacgcgtcagatgagaatcctgcggattttgtggaccctgaaactcct
cttggtgataagaaaaggctctcatctcagatggctaaacagtacagtcctgctgccgtt
gagaaatcatggtatgcttggtgggagaaatctgacctttttaaggcggatgctaagagt
tccaagccgccctttgttattgttcttcctcctccaaatgtgactggagccttgcatatt
ggccatgccctaacatctgccattgaggatacgattattcgttggaagagaatgtctggg
tataatgctttatgggtgcccgggatggaccatgctggtatagctacacaggttgtggtt
gaaaagaagctcatgcgtgaaagaggattgactaggcatgacgttggccgcgaagaattc
gtaaatgaagtgtggaagtggaagaaccaacatggtggcacgattctgacacagcttcgg
cgtctaggagcttctcttgattggtctcgtgagtgttttacaatggacgagcaaagatca
aaagctgtcactgagggctttgtacggttatacaaggaagggcttatctacagggacatt
aggcttgttaattgggattgtgttttgagaacagccgtatctgacgttgaggtggagcat
atcgatatcaaagaaaaaacgctactaaatgttcctggctatgataagccagtagaattt
ggtcttcttacgtcatttgcttaccctctggagggaggcttgggagaggttgttgttgcc
actacaagggtggaaacgatgcttggagatactgccattgctattcatcccgatgatgca
agatacaagcatcttcatgggaaatttgctgtgcacccatttaatggacggaaaatacca
atcatctgtgatggaatacttgttgatccaaactttggtactggctgtgttaagattact
cctgcccatgaccccaatgattgtgaggtcggaaagcgtcacaatcttgaatttataaac
atattagctgatgatggaaaaatcaacacaaatggcgggtctgacttcacagggatgcca
cgctttgcagcgcgtgaggcagttcttgaagctctgaacaagaaggggctttacagaggt
gcccaaaacaatgaaatgaggcttggactttgccaaagaaccggtgacgttattgagcct
atgattaaacctcaatggtacgtcaattgcagcatgattggaaaggaggctctcgatgtt
gctatcaatgatgagaacaagaagctcgagtttgtaccaaagcagtacactgcagaatgg
agaagatggctagagaacatacgtgactggtgtatttcaagacagctttggtggggccac
cggattccagcatggtacgccgctctagaggaagatgagcgcaaggaggttggggcgtac
aatgaccattgggttgttgctagaactgaggaagaagctcggaaagaggctgctgaaaaa
ttttctgggaaaaagtttgaactgacgcaagatcaggatgtacttgatacgtggttttct
tctgggctctttccattatctgttttgggatggcccgatgaaactgaagacttcaaagct
ttctatccaacatctgtcctagaaactggacacgatattctctttttttgggttgctcgt
atggttatgatgggaatgaaactaggtggtgatgttccattcagtaaggtttatttccat
cctatgatacgtgatgcacatgggcgtaagatgtcaaaatctcttggaaatgtcattgat
ccgcttgaagtaataaacggggtaactcttgatgctcttcataagagattagaagagggc
aacttggatccaaaagagctggttgttgccaaagaaggacaagtgaaggactttccaaat
ggtatttctgaatgtggtgctgacgctcttcgctttgcactcgtctcttacactgctcag
tctgacaaaataaacttggacatcctccgagtggttggttaccgccaatggtgtaataag
ctgtggaacgccgttagatttgcgatgatgaggcttggcgatgattattcgcctccgctg
actctaacccctgaaacgatgccattcagctgccagtggattctctctgtgctaaacaag
gcaatagcaaagacagtggagtcactgaatgcatttgagttctcggatgcagccaacaca
gtctatgcatggtggcaatatcaattctgcgatgtctacatcgaagctatcaagccttat
tttgctggcgacaaccctgcgtttgcttcagagagggctcatgcacaacatgctctctgg
gtatctctggagactggtttgagactgcttcacccgcttatgccctttgttactgaagag
ctatggcaatggctgccgtcacccaaaaacactgaaaggaaggcttctattatgatatgt
gactatccatctgcaatagagaattggacaaatgaaaaagtggagaccgaaatggaaacc
gttctagcgagcgtgaagtgcctgagggcactccgggctgggttaatggagaaacagaag
aatgaaaggttacctgcttttgctgtgtgtgaaaacaacgtaacatctgaaattgtaaaa
tctcacgagttggagatcagaacccttgcaaatctatcgtccttggaggttctgttaaag
ggagaacacgcagccccacctggatccgcagttgagacggtgaacgagaacctcaaggta
tatctcaaagttaacagagccattaacacagaagctgaacaagaaaagatcagaaacaag
attgacgaactacaaaaacaaaaggagaagttgcagaaggtgatgagcgcgtccgggtac
gaagagaaggtccctgcgaacatcaaagaagacaacgcgacaaagcttgctaagattctc
caagaattcgatttctttgagaaggaaaatgctcgtctcgttgcagagacaggaaatgag
caatag
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