Brassica napus (rape): 106432927
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Entry
106432927 CDS
T04128
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106432927
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
106432927
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GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_6
Lactamase_B
Lactamase_B_2
Ig_VWA7
Motif
Other DBs
NCBI-GeneID:
106432927
NCBI-ProteinID:
XP_048607807
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Position
A2:23273713..23276931
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AA seq
615 aa
AA seq
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MAIDCLVLGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPDFSILSKSGDFDNTI
SCLIITHFHMDHVGALPYFTEVCGYNGPVYMSYPTKALSPLMLEDYRRIMVDRRGEEELF
TSAHIASCMNKVIPLDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNM
TTDRHLGAAKIDRLQLDLLISESTYATTTRGSKYPREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHVTHNPFD
FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH
KLMSGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNIVLVHGEKPSM
MSLKDKITSELGIPCFVPANGETVSVASTTFVKANASDMFLKICSNPNFRFSNSSTQLRV
TDQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKDHVVSLAYCCPVKVKGESDDVGLIKQL
SEKISETVSCADEIHESETCLQVGSFKSSLCLKEECVHRRGISSSCSEVKFLCCNWSVAD
LELGWGIINAMKQNL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattgcctcgtactgggtgctggacaagagatagggaagagctgtgtagta
gtaacgatcaatggcaaaaagataatgttcgattgtgggatgcacatgggctgcgacgat
cacaaccgatacccagatttctctatcctctccaagtccggtgatttcgataacaccatc
tcctgtctcatcatcactcactttcatatggatcatgttggagcgcttccttacttcacg
gaggtctgtgggtacaatggtcctgtttacatgtcgtatcccacgaaggctttgtctccg
ttgatgcttgaggactataggaggattatggtggatagaagaggcgaggaggagcttttc
acttcggcccatatcgctagttgcatgaacaaagtaattccattggacttgaagcaaacg
attcaagttgatgaagaccttcaaatccgtgcctattatgcagggcatgtacttggagca
gtgatggtgtatgcaaaggtcggagatgcggcgattgtgtacaccggagattacaatatg
actacagatagacatcttggagcagcgaaaatcgacaggctccagttggatcttctcata
tcagagtccacatatgcaactaccactcgcggctcaaaatatccccgggagagagagttc
cttcaagctgttcataaatgtgttgctggcggagggaaagctctgattccttcatttgct
cttggaagggctcaggaactatgcatgctgctcgatgattactgggaacgcatgaatata
aaggttccaatttacttctcgtcaggtttgaccatccaagcaaacatgtattacaaaatg
ctcataagctggacaagccagaacgtcaaagaaaagcatgttacacataacccatttgat
tttaagaatgttaaagattttgatcgatctcttatacatgcacctgggccatgtgttctc
tttgccacacccgggatgctctgtgccggattctcactagaagtgttcaagcattgggct
ccttcacccctaaatctcgttgccctgcccggttactctgtggctggtactgttggtcac
aaactgatgtctggtaaaccaacaacggttgatctctacaatggcaccaaggttgatgtc
cgttgcaagatacatcaagtggctttcagtcctcacacagatgcaaaaggaataatggat
ctcacaaagtttctttccccaaagaacattgtactcgtgcacggagaaaaacccagcatg
atgtctctcaaggacaagataacctcagagcttggcatcccctgtttcgtccctgccaat
ggcgaaacggtttcggtcgcttcgaccacttttgtaaaagcaaacgcttctgatatgttt
cttaaaatctgctctaacccaaacttcagattctcaaactcctctactcagctccgtgtt
acggaccagagaaccgcagatggggttttggtaatagagaagagcaaaaaggcaaaaatt
gttcaccaagatgaagtctctgaggtgttacatgagaaagaccatgtggtctctttggct
tattgttgtcctgtcaaagttaagggagaatcagatgatgttggtctgatcaaacagttg
tcggaaaagatctcggagacagtgtcttgtgctgatgagatccatgaatctgagacatgt
ttgcaggttggatctttcaagagttctttgtgtctgaaagaggagtgtgtgcatagaaga
gggataagtagtagctgtagtgaagttaagttcttgtgttgcaactggtctgttgcagat
ttagagcttggttggggaatcatcaatgctatgaaacaaaatctttga
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