Brassica napus (rape): 106433204
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Entry
106433204 CDS
T04128
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106433204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106433204
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106433204
mRNA degradation factors
5'-3' decay
Decapping complex
106433204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
WH1
Motif
Other DBs
NCBI-GeneID:
106433204
NCBI-ProteinID:
XP_013729503
UniProt:
A0A078JTG7
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Position
C8:2655938..2658385
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AA seq
365 aa
AA seq
DB search
MFQNGKLVPPNMHQYQNSTRLLNLKVLRRIDPFIEEILITAAHVTLYEFNIQKSEWSRKD
VEGSLFVVKRNRQQPRFQFIVMNRRNTDNLVEDLLGEFEYEVQGPYLLYRNAAQEVNGIW
FYNQSECEELARLFDRLLSAYSKVNQKPNTSSSKRELEELEDVPTVSVMDGSLEPSSSGR
DTPNDPAFVNFFSSAMALGYTTSGSASGPPYQSSANPHQPTVSPAAAAPPQILSPPPLPS
SSPLMPLFDNNPNRISSNNSNVHTDLVTPSSFFSPPRMMAQPHLVPGSSMPPLNLNNPTY
QQDLHGTPMLQPFPPPTPPPSLAPTHNGPVINRDRVKEALLALVQENEFIDMVTRALQNA
HQPSS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaacgggaagctggtcccaccgaatatgcaccagtaccagaacagcacgagg
ctcctcaatctcaaagtcctccggcgaatcgatccgttcatcgaggaaatcctcatcacg
gcagctcacgtcaccttatacgaattcaacattcagaaaagtgaatggagtcgtaaggat
gttgaaggatctttgttcgtcgtcaaaagaaatagacagcagcctcggtttcagtttatt
gtgatgaatcgacgtaatacagataacttggtggaagatctactgggagagtttgagtat
gaagtgcaaggtccatatttgctttaccgtaatgcggctcaagaagttaatggcatttgg
ttctataatcaaagtgaatgtgaggagcttgcacgtctcttcgacaggttacttagcgca
tattccaaggttaaccagaagccaaatacttcatcttcaaaacgggagcttgaggaattg
gaagatgtgcctacagtgtcagttatggatggttctcttgaaccgtcttcaagtggtaga
gatacccctaatgatcctgcttttgtcaacttcttcagctcagcgatggctcttgggtac
actacgagtggatcagcaagtggaccaccataccaatcatcggcaaatcctcaccaaccc
accgtttcccctgcggcagctgcacctccacagatactatcaccaccgcctctaccatcc
tcctctcctctaatgcctctttttgacaacaatcctaatcgtatcagtagcaacaactcc
aatgttcacacagatttggtgacgccgtcctctttcttcagccccccacggatgatggca
caaccacacctcgttcctggctcatctatgcctcctctgaaccttaataatccgacttac
cagcaggacctacatggcactccgatgctccagcctttcccaccaccaactccaccacca
tcactcgctcctacacacaatggcccagttatcaacagagacagagtcaaagaagccttg
ttagctctggttcaggagaatgaattcatcgacatggtgacccgagctttacaaaatgca
catcaaccatcaagctga
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