KEGG   Brassica napus (rape): 106433275
Entry
106433275         CDS       T04128                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
bna  Brassica napus (rape)
Pathway
bna04142  Lysosome
bna04144  Endocytosis
bna05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:bna00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106433275
   04142 Lysosome
    106433275
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    106433275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bna04131]
    106433275
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bna04147]
    106433275
Membrane trafficking [BR:bna04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    106433275
Exosome [BR:bna04147]
 Exosomal proteins
  Proteins found in most exosomes
   106433275
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B
Other DBs
NCBI-GeneID: 106433275
NCBI-ProteinID: XP_013729579
LinkDB
Position
C1:48104828..48113676
AA seq 1707 aa
MAAANAPITMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVVFWKWI
TPKMLGLVTQTSLYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPDEKWLVLIGISPGS
PERPQLVKGNMQLFSVNQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDTHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLMEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRDGLVSDAIE
SFIRAEDATHFLEVIRATEDANVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG
YGPPPPMGGMPGMPPMPPYGMPPMGGY
NT seq 5124 nt   +upstreamnt  +downstreamnt
atggcggcagcaaacgccccaatcacgatgaaggaggtcctaacgcttccgagcattggg
atcaaccagcaattcatcacgtttacgaatgtcactatggagtctgacaagtacatatgt
gtacgagagacggcgccgcagaacagcgtcgtgattattgatatgaacatgccgatgcag
cctctaaggagacccattactgctgattctgctcttatgaacccaaactccaggatcctt
gccttgaaagctcaagttccaggaaccactcaggatcatcttcagatatttaacatcgaa
gcaaaagcaaagttgaaatcacatcagatgcctgagcaggttgttttttggaaatggatt
acaccaaagatgttggggctggtcacacaaacttccttgtatcattggtcgattgaaggt
gattctgagccagttaagatgtttgatagaacggccaatttggcaaacaatcaaattatt
aactataagtgctctcctgatgagaagtggttggtgttgattggaatttctcctggctct
cctgagagaccacaattggtaaaagggaatatgcagctattctctgtaaatcaacagcgg
agccaggcccttgaagcgcatgctgcttcatttgctcagtttaaggtccctgggaatgag
aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgtcattgagcttggtgcacaaccaggaaaaccatcattctcaaagaagcag
gcagatctctttttccccccggattttgcggatgattttccagtagccatgcaggtctca
cacaaatttaacttgatatatgtcataaccaagcttggcctgttgtttgtatacgatcta
gagacggcttctgctatctacagaaatcggattagtccagacccaattttcttgacttct
gaagcttcttcggtcgggggtttctatgccattaataggcgaggacaagttcttttggct
acagtaaacgaggctacgataataccatttattagcggtcaattgaacaatttggaactt
gctgtcaatctggctaaaagaggaaacctccctggtgcggaaaatctggttgtccagagg
ttccaagagttatttgctcaaacaaagtacaaggaggctgctgaacttgctgctgaatct
cctcaggggattctacgaacacctgatacggtggctaagttccagagtgttcctgtacaa
gcagggcaaactcctcccctgttacagtattttgggacccttttgactagagggaaactc
aattcatacgagtctttggaactatcccggcttgttgtgaatcaaaacaagaagaatctt
ttggaaaactggttggcagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgacctggctctgaaaatatacatcaaagctcgagctactccaaaa
gtcgtagcagcttttgcagagcgaagggagtttgacaaaatactgatttactcaaagcag
gttggctacacacctgattacatgtttcttctgcaaacaatactccgtacggatcctcag
ggagcagtaaatttcgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacaccattactgatcttttccttcagaggaatctgatccgtgaagcgactgctttcctt
ctggatgttctgaaaccaaatttacctgagcatgcttttctgcaaactaaggttctggag
atcaatttggtaacctttcccaatgtggctgatgcaattttagcaaatgggatgttcagc
cactatgaccgccctcgtgttgctcagctttgtgaaaaggctggactttatatccaatct
ttaaagcattactcagagttgcctgatattaaacgtgtaattgtgaacacacatgctatt
gagccgcaggctcttgtcgagtttttcggtactctttctagcgagtgggctatggagtgc
atgaaggatcttctgctggtcaacttgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgtgagcaacttggcgttgatgcatgcattaaactctttgaacagtttaaa
tcgtatgaagggctatactttttcctaggttcatatttgagtatgagtgaggatcctgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggtcgagcgt
gtcactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct
aagcttcctgatgcccgacctttgataaatgtctgcgaccgttttggctttgtacctgat
cttactcattacctgtacacaaacaacatgcttcgttacattgaaggttacgttcaaaag
gtcaaccctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcgttgcttccagttgaaccccttgtt
gaggaatgtgagaagagaaatcgactccgtctccttactcagttcttggagcatctagtt
agtgagggaagccaagatacgcatgtccacaatgccttgggtaaaattatcatagacagc
aacaacaatcctgagcatttcctgaccaccaacccgtactatgactccaaggttgtgggt
aagtactgcgagaaacgtgatcccaccttggctgttgtggcatacagaagaggacaatgt
gatgaagaactcatcaatgtcaccaacaaaaactctttgttcaagttacaagccaggtac
gtagtggagaggatggatggtgacctctgggacaaggttcttatggaagaaaatgagtat
agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccagag
caagtctctgcagctgttaaagcattcatgactgctgatctgccgcatgaacttattgaa
cttctggaaaagattgtgcttcagaactcggccttcagtggaaacttcaatctgcaaaat
ctgcttatactgacagcaatcaaggcagatccgtctagagttatggattacattaacagg
ctggataattttgatggtccggctgttggagaagtggcggttgatgcccaattatatgag
gaagcatttgcgatttttaagaaatttaacttaaatgttcaagctgtcaacgtactgttg
gataacgtcagaagcattgagcgtgctgttgaatttgctttccgggtcgaagaggattcc
gtttggagccaagtggctaaggctcagctcagagatggactagtcagtgatgcaattgag
tctttcatccgtgctgaggatgccactcatttcttggaggtcatacgtgctactgaagat
gctaatgtctatgatgacttggtcagataccttcttatggttagacagaaggtgaaagaa
cccaaggttgatagtgagctcatctatgcttatgcaaagattgaaaggttgggtgagatc
gaagaatttattctgatgccaaacgttgcgaacctacaaactgtcggtgatcgcctgtat
gacgaagctctgtatgaggctgcaaaaataatatatgcgttcatttcaaactgggccaag
ttagccgttacacttgtgaagttgcagcagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgcagaggaattc
cggttggctcaaatatgtggacttaacgttattatacaggtggatgacctggaagaagtt
agcgagttctaccagaacagaggatgcttcagcgaattaatctcacttatggagagtgga
cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtatgccaga
tatcgttatgagaagcttatggagcacatcaagttgttctcgactcgcctcaatattccc
aagcttatacgggcctgtgatgaacaacagcattggcaggagcttacctatctttacatt
caatatgatgagtttgataatgctgctaccactgtcatgaaccactctcctgaagcatgg
gagcacatgcaattcaaagacattgttgccaaggttgcgaatgtcgagctttactacaag
gctgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagatcacacacgtgtcgtggatattatgcgcaaggctggtcagttacgc
cttatcaagccctacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttgcgcgagtctatcgatttg
catgacagctttgaccagataggcctcgctcagaagattgagaaacacgagcttgtggaa
atgagacgtgtggctgcgtatatctacaagaaagccggtagatggaagcaatcaattgct
ttgtcgaagaaagataacatgtacaaggactgtatggaaactgcttcacaatccggcgac
catgaccttgcagaacaacttctcgtttacttcattgaacaggggaagaaggaatgcttt
gccacatgtctctttgtgtgttatgacttaatcagaccagatgttgctctagaacttgct
tggatcaacaacatgattgactttgcgttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggacgaactaatcaaggacaagctagaggcacagaaagaagtgaaggcc
aaagagcaggaagagaaggatgttatgtcccaacagaacatgtacgcgcaactattgcca
ttggctctacctgcgccaccgatgccaggaatgggaggaggtccagggatgggaggcggt
tatggtccgccaccaccgatgggtggaatgccaggaatgcctccaatgccaccatatgga
atgcctccgatgggcgggtactaa

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