Brassica napus (rape): 106433275
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Entry
106433275 CDS
T04128
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
bna
Brassica napus (rape)
Pathway
bna04142
Lysosome
bna04144
Endocytosis
bna05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106433275
04142 Lysosome
106433275
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106433275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106433275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106433275
Membrane trafficking [BR:
bna04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
106433275
Exosome [BR:
bna04147
]
Exosomal proteins
Proteins found in most exosomes
106433275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
106433275
NCBI-ProteinID:
XP_013729579
LinkDB
All DBs
Position
C1:48104828..48113676
Genome browser
AA seq
1707 aa
AA seq
DB search
MAAANAPITMKEVLTLPSIGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVVFWKWI
TPKMLGLVTQTSLYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPDEKWLVLIGISPGS
PERPQLVKGNMQLFSVNQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSEWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDTHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLMEENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLRDGLVSDAIE
SFIRAEDATHFLEVIRATEDANVYDDLVRYLLMVRQKVKEPKVDSELIYAYAKIERLGEI
EEFILMPNVANLQTVGDRLYDEALYEAAKIIYAFISNWAKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFSELISLMESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDIINDLLNVL
ALRLDHTRVVDIMRKAGQLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGD
HDLAEQLLVYFIEQGKKECFATCLFVCYDLIRPDVALELAWINNMIDFAFPYLLQFIREY
SGKVDELIKDKLEAQKEVKAKEQEEKDVMSQQNMYAQLLPLALPAPPMPGMGGGPGMGGG
YGPPPPMGGMPGMPPMPPYGMPPMGGY
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcaaacgccccaatcacgatgaaggaggtcctaacgcttccgagcattggg
atcaaccagcaattcatcacgtttacgaatgtcactatggagtctgacaagtacatatgt
gtacgagagacggcgccgcagaacagcgtcgtgattattgatatgaacatgccgatgcag
cctctaaggagacccattactgctgattctgctcttatgaacccaaactccaggatcctt
gccttgaaagctcaagttccaggaaccactcaggatcatcttcagatatttaacatcgaa
gcaaaagcaaagttgaaatcacatcagatgcctgagcaggttgttttttggaaatggatt
acaccaaagatgttggggctggtcacacaaacttccttgtatcattggtcgattgaaggt
gattctgagccagttaagatgtttgatagaacggccaatttggcaaacaatcaaattatt
aactataagtgctctcctgatgagaagtggttggtgttgattggaatttctcctggctct
cctgagagaccacaattggtaaaagggaatatgcagctattctctgtaaatcaacagcgg
agccaggcccttgaagcgcatgctgcttcatttgctcagtttaaggtccctgggaatgag
aatccttctattcttatatcctttgcaagcaagagctttaatgctgggcagataacatca
aagttgcatgtcattgagcttggtgcacaaccaggaaaaccatcattctcaaagaagcag
gcagatctctttttccccccggattttgcggatgattttccagtagccatgcaggtctca
cacaaatttaacttgatatatgtcataaccaagcttggcctgttgtttgtatacgatcta
gagacggcttctgctatctacagaaatcggattagtccagacccaattttcttgacttct
gaagcttcttcggtcgggggtttctatgccattaataggcgaggacaagttcttttggct
acagtaaacgaggctacgataataccatttattagcggtcaattgaacaatttggaactt
gctgtcaatctggctaaaagaggaaacctccctggtgcggaaaatctggttgtccagagg
ttccaagagttatttgctcaaacaaagtacaaggaggctgctgaacttgctgctgaatct
cctcaggggattctacgaacacctgatacggtggctaagttccagagtgttcctgtacaa
gcagggcaaactcctcccctgttacagtattttgggacccttttgactagagggaaactc
aattcatacgagtctttggaactatcccggcttgttgtgaatcaaaacaagaagaatctt
ttggaaaactggttggcagaggataagttagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgacctggctctgaaaatatacatcaaagctcgagctactccaaaa
gtcgtagcagcttttgcagagcgaagggagtttgacaaaatactgatttactcaaagcag
gttggctacacacctgattacatgtttcttctgcaaacaatactccgtacggatcctcag
ggagcagtaaatttcgctttaatgatgtcccaaatggaaggaggttgtccagttgactac
aacaccattactgatcttttccttcagaggaatctgatccgtgaagcgactgctttcctt
ctggatgttctgaaaccaaatttacctgagcatgcttttctgcaaactaaggttctggag
atcaatttggtaacctttcccaatgtggctgatgcaattttagcaaatgggatgttcagc
cactatgaccgccctcgtgttgctcagctttgtgaaaaggctggactttatatccaatct
ttaaagcattactcagagttgcctgatattaaacgtgtaattgtgaacacacatgctatt
gagccgcaggctcttgtcgagtttttcggtactctttctagcgagtgggctatggagtgc
atgaaggatcttctgctggtcaacttgagaggcaaccttcagataatcgttcaggcttgc
aaggagtactgtgagcaacttggcgttgatgcatgcattaaactctttgaacagtttaaa
tcgtatgaagggctatactttttcctaggttcatatttgagtatgagtgaggatcctgag
attcacttcaagtacattgaagcagctgccaagactggtcaaataaaggaggtcgagcgt
gtcactagagagtctaacttttatgatgctgaaaagacgaagaactttttgatggaagct
aagcttcctgatgcccgacctttgataaatgtctgcgaccgttttggctttgtacctgat
cttactcattacctgtacacaaacaacatgcttcgttacattgaaggttacgttcaaaag
gtcaaccctgggaatgctcccttagttgtggggcagttgcttgatgacgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcgttgcttccagttgaaccccttgtt
gaggaatgtgagaagagaaatcgactccgtctccttactcagttcttggagcatctagtt
agtgagggaagccaagatacgcatgtccacaatgccttgggtaaaattatcatagacagc
aacaacaatcctgagcatttcctgaccaccaacccgtactatgactccaaggttgtgggt
aagtactgcgagaaacgtgatcccaccttggctgttgtggcatacagaagaggacaatgt
gatgaagaactcatcaatgtcaccaacaaaaactctttgttcaagttacaagccaggtac
gtagtggagaggatggatggtgacctctgggacaaggttcttatggaagaaaatgagtat
agaagacaacttattgaccaagttgtgtctactgctttacccgaaagcaagagcccagag
caagtctctgcagctgttaaagcattcatgactgctgatctgccgcatgaacttattgaa
cttctggaaaagattgtgcttcagaactcggccttcagtggaaacttcaatctgcaaaat
ctgcttatactgacagcaatcaaggcagatccgtctagagttatggattacattaacagg
ctggataattttgatggtccggctgttggagaagtggcggttgatgcccaattatatgag
gaagcatttgcgatttttaagaaatttaacttaaatgttcaagctgtcaacgtactgttg
gataacgtcagaagcattgagcgtgctgttgaatttgctttccgggtcgaagaggattcc
gtttggagccaagtggctaaggctcagctcagagatggactagtcagtgatgcaattgag
tctttcatccgtgctgaggatgccactcatttcttggaggtcatacgtgctactgaagat
gctaatgtctatgatgacttggtcagataccttcttatggttagacagaaggtgaaagaa
cccaaggttgatagtgagctcatctatgcttatgcaaagattgaaaggttgggtgagatc
gaagaatttattctgatgccaaacgttgcgaacctacaaactgtcggtgatcgcctgtat
gacgaagctctgtatgaggctgcaaaaataatatatgcgttcatttcaaactgggccaag
ttagccgttacacttgtgaagttgcagcagttccaaggtgctgttgatgctgcaaggaaa
gcaaacagtgcaaagacatggaaggaagtctgctttgcttgtgttgatgcagaggaattc
cggttggctcaaatatgtggacttaacgttattatacaggtggatgacctggaagaagtt
agcgagttctaccagaacagaggatgcttcagcgaattaatctcacttatggagagtgga
cttggtctggaacgggctcacatggggatcttcaccgagttgggtgtactgtatgccaga
tatcgttatgagaagcttatggagcacatcaagttgttctcgactcgcctcaatattccc
aagcttatacgggcctgtgatgaacaacagcattggcaggagcttacctatctttacatt
caatatgatgagtttgataatgctgctaccactgtcatgaaccactctcctgaagcatgg
gagcacatgcaattcaaagacattgttgccaaggttgcgaatgtcgagctttactacaag
gctgttcacttctacttgcaagagcaccctgatataatcaacgatcttctcaatgtgctt
gctctgcggttagatcacacacgtgtcgtggatattatgcgcaaggctggtcagttacgc
cttatcaagccctacatggttgcagttcagagcaacaatgtttctgctgtaaatgaagct
ctgaatgagatatacgtagaagaagaagactatgacaggttgcgcgagtctatcgatttg
catgacagctttgaccagataggcctcgctcagaagattgagaaacacgagcttgtggaa
atgagacgtgtggctgcgtatatctacaagaaagccggtagatggaagcaatcaattgct
ttgtcgaagaaagataacatgtacaaggactgtatggaaactgcttcacaatccggcgac
catgaccttgcagaacaacttctcgtttacttcattgaacaggggaagaaggaatgcttt
gccacatgtctctttgtgtgttatgacttaatcagaccagatgttgctctagaacttgct
tggatcaacaacatgattgactttgcgttcccgtatctcctccagtttatccgagaatac
tctggcaaagtggacgaactaatcaaggacaagctagaggcacagaaagaagtgaaggcc
aaagagcaggaagagaaggatgttatgtcccaacagaacatgtacgcgcaactattgcca
ttggctctacctgcgccaccgatgccaggaatgggaggaggtccagggatgggaggcggt
tatggtccgccaccaccgatgggtggaatgccaggaatgcctccaatgccaccatatgga
atgcctccgatgggcgggtactaa
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integrated database retrieval system