Brassica napus (rape): 106433673
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Entry
106433673 CDS
T04128
Name
(RefSeq) transcription initiation factor IIE subunit alpha isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
bna
Brassica napus (rape)
Pathway
bna03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106433673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bna03021
]
106433673
Transcription machinery [BR:
bna03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
106433673
Prokaryotic type
Archaeal type
TFE
106433673
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
DUF5093
Replic_Relax
DUF7836
Motif
Other DBs
NCBI-GeneID:
106433673
NCBI-ProteinID:
XP_048638629
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All DBs
Position
A1:complement(5491217..5494078)
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AA seq
487 aa
AA seq
DB search
MEISVPVQKATVVPKPFIRLMRLLARTLYDDNNLTTLSDNQKKSAKGDSRGNIVMVLDAL
MRFVCHLFTFYLYGHKVYYVKLNCHNGLFIYGISFVLCPARRQWVREEDLASDLKKNSKQ
VRKILRHFEEEHLVTRYQRKETAKRAKIYNVAVAATAHGREVDNVKLHTQSYCCLDYQHM
YDTARLRLQKIKRKLKDELEDKYTLQKYGCPNCNRKYSALDALRLISMEDDAFHCERCNG
VLVVECNNLSSKEVVDGGDNAKRRQRQRLQFAEALMDQINRVNDIPFPVYESFPEWEARA
AMDARENGVFNNNDPFGSQGVNGSTPMLYLGETKVEVNLRDGKEDGVPSSKPMPQWMIRQ
GMNLTKEQRGEMSQEEKVGGVSEGEVLLSDDYKPSAMGNDNDTYLKETYYAALLQQLEAA
QKMNQQESTPDIQSATTCSDRQVGMKSKREDEEDAECEEGAHVSANGAGVEEEEEEEEDD
GVEWEEG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcagtccccgttcagaaagccaccgttgtgcccaagccttttatcaggcta
atgaggcttttagcaaggactctctatgatgataataatcttactacgttaagcgataat
cagaagaaatctgcaaaaggtgacagcagagggaatatcgttatggtgttggatgctctt
atgaggtttgtatgccatctctttacgttctatctttatggccataaagtctattatgtg
aaattaaattgtcacaatggtcttttcatttatggtatttcttttgttctatgtcctgct
aggcggcaatgggttagagaagaagacttggcaagtgacttgaagaagaactccaagcaa
gtccgaaaaatattaagacattttgaagaagaacatttggtcacacgttaccaaaggaaa
gagactgcaaagcgtgcgaagatatataatgttgcagttgctgccacagctcatggccgt
gaagtggacaatgttaagctccacacgcaatcatattgctgtcttgattatcaacatatg
tatgatactgctcgtttgcgtctgcaaaagattaaaaggaaactcaaagatgaattagaa
gataagtacactcttcagaagtatggatgtcctaactgcaacagaaaatatagtgcacta
gatgccctgagattaatttctatggaagacgatgcttttcattgtgagagatgcaatggt
gtacttgttgtggaatgtaataatctatcttccaaagaagttgtagatggaggtgacaat
gcaaagagacgtcagcggcaaagactccagtttgcggaggctttgatggatcaaattaat
agagtaaatgacattccgtttcccgtctatgaaagttttccggaatgggaggctcgtgca
gctatggatgctcgtgaaaatggtgtttttaataataatgatccttttgggtcacagggt
gtgaatggttcaacaccgatgctatatctcggtgagacaaaggttgaggttaaccttcgt
gacggaaaagaagatggagttcctagtagcaaaccgatgcctcaatggatgattaggcaa
ggaatgaatctgaccaaggaacaaagaggagagatgagtcaggaagaaaaggttggtggt
gtctcagaaggagaagtattactttctgatgactataaaccatcagccatgggaaatgac
aatgatacctatttgaaggaaacttactatgccgctctactgcagcagctagaggcagct
caaaaaatgaaccagcaagaatctacccctgacattcaatcggctactacatgctcagat
cgtcaggttggtatgaagtccaaacgtgaagatgaagaagatgctgaatgtgaagaaggg
gctcatgtgtcagcaaatggagcaggtgttgaagaagaagaagaagaagaagaagacgac
ggtgttgagtgggaagaaggctga
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