Brassica napus (rape): 106433713
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Entry
106433713 CDS
T04128
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bna03016
]
106433713
Enzymes [BR:
bna01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
106433713
Transfer RNA biogenesis [BR:
bna03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106433713
Prokaryotic type
106433713
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
106433713
NCBI-ProteinID:
XP_013729992
UniProt:
A0A816SDW9
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Position
A6:complement(8576351..8578219)
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AA seq
521 aa
AA seq
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MENQEPKLEESPHDEAPDQEPEQKKLKISTEGDEPASSAAVTAVSGGAERRLPKYKRRKV
AIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPEADRNKPRQYEWARSARTDKGV
SAVGQVVSGRFYVDPPGFVERLNSNLPDQIRVFGFKRVAPSFSSKKFCDRRRYVYLVPVF
ALDPCSHSEAEMARSDSGYEYVKCVECCEKGYKIPLGVFGKESVDDDGKSSEVQSDISSN
NCGALKVETLSSNGEKTLNPDSEEEMTKSESKFCYGEKEMERFNRILSYYVGSHNFHNFT
TRTKAADPAANRYILSFNANTVITLGGKDFVKCEVVGQSFMLHQIRKMIGLAVAVMRNYA
PESVIQTAFKKDVRIVVPMAPEVGLYLDECFFTSYNKRFKVSHEEVSMEEYKEVAEEFKW
KHVYSHIGSAEEKDGIVAIWLHSLNERNYPDLRVAEHKPDEVIVYKKIDAASEEKINEEE
AAVKENANGAGELLLVSKVNDETSEEKNMEEGDRVEEKATE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcaggagcccaaactcgaggaatcgccccacgacgaggctcctgatcaggaa
ccagagcagaagaagctcaagatctccaccgaaggcgatgaaccagcttcgtcagctgct
gtaaccgccgtaagcggcggcgctgagcgaagactgccgaaatacaaacgccggaaagtc
gccatcgtgttcgcgttctgcggggtagggtaccaaggaatgcagaagaaccccggcgcg
aaaaccatcgaaggcgagctcgaggaggctctgttccacgccggcgccgtacccgaagcc
gatcggaacaagccacgacagtacgagtgggctcgatcggctcgaaccgataagggcgtg
agcgcggtgggacaggtcgtctccggtcgcttctacgtcgacccgcctgggttcgttgag
cggctcaactcgaatctccccgatcagattcgtgtgtttgggttcaagcgtgtagcgccg
tcgtttagctcgaagaagttctgcgatcggaggaggtatgtgtatctggtccctgtgttt
gctcttgatccgtgctcgcatagtgaagctgagatggctagatcggactcgggatacgag
tatgtgaagtgtgttgagtgttgcgagaaagggtataagatcccactcggtgttttcggc
aaagaaagtgtcgatgatgatggtaaatcatcagaggttcagtcagacatttcgtcgaac
aactgtggtgcattaaaggttgagactttaagctctaacggagagaaaactctaaaccca
gattctgaggaagagatgactaagagtgaaagcaagttctgttatggagagaaggagatg
gagaggtttaataggatactaagctattacgttggttcacataacttccacaacttcacc
actagaacgaaagcagcagacccagctgcgaaccgttacattctctccttcaatgcgaac
acagtgattacactcggcgggaaagactttgtcaagtgtgaagttgtgggacagagcttc
atgcttcatcagatccggaaaatgattggacttgctgttgctgtcatgagaaactacgca
cctgaatcagtgattcaaaccgctttcaagaaggatgtgaggatagttgtaccgatggcg
ccagaagttggactataccttgatgaatgcttcttcacatcttataacaaaaggtttaaa
gtcagtcacgaggaggtgtcaatggaagagtacaaggaagtagctgaagaattcaaatgg
aagcatgtttactctcatattggctcagcagaagaaaaagatggaattgtggcgatttgg
ttgcattcattgaacgaaagaaactatccagacctacgtgttgctgaacacaaaccagat
gaagtcattgtctataagaagattgatgcagcctctgaagaaaagatcaatgaagaggaa
gctgctgtgaaagagaacgctaatggcgctggtgagctactccttgtcagtaaggtaaat
gatgaaacctctgaagaaaagaatatggaagaaggcgaccgagtggaagagaaggcgacc
gagtga
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