Brassica napus (rape): 106433776
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Entry
106433776 CDS
T04128
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106433776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106433776
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106433776
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106433776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
DUF5965
Motif
Other DBs
NCBI-GeneID:
106433776
NCBI-ProteinID:
XP_048627174
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All DBs
Position
A3:complement(3516536..3520777)
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AA seq
534 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKWNVYDTDNVNQKEKFEAELKKEIKKLQRY
RDQIKTWIQSSEIKDKKVSASDEQSLVDARKLIEREMERFKICEKETKTKAFSKEGLGQQ
PKTDPKEKAKSETRDWLNNVVSELESQIDSFEAELEGLSVKKGKSRPPRLTHLKTSITRH
KDHIIKLELILRLLDNDELSPEQVNDVKDFLDDYVERNQDDFDEFSDVDELYSTLPLNEV
EGLEDLVTAGPLVKGTPLSMKSSVAASASQVRSISLPTHHQSTSQEKTDDTTLPDSNSET
LPKTPPQKNGALHSAPSTPVGERPSSNVPVSSVPNAPVALSTSVPVQTSTERMGSLSTVA
AKEEDATTLPSRKPTSSVADAPPRGIGRVNFPTQPQLSQPLSPSAANGTGATSSAAEIAK
RKIMGVESNVQPLTSPLSKMVLPPAAKGNDGTISDGNPGDVAASIGRAYSPSIVSGLQWR
PGSPFQSQNETVRGRTEISPDQREKFLQRYQQVLSERNEKQFSSQQQNPLLQQM
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcggaagctacaaggcgagatagatcgggtgctgaagaaggttcaggaa
ggtgttgacgtcttcgacagcatctggaacaagtggaatgtctatgatacggataatgtt
aaccaaaaggaaaagtttgaggctgagttgaagaaggagatcaagaagctgcagcggtat
agggaccagatcaagacttggattcagtctagtgagatcaaagataaaaaagtcagtgca
tcagatgagcaatccctggttgacgctcggaagctcattgagcgagaaatggagaggttt
aaaatatgtgagaaagagaccaagacaaaagcattctctaaggaaggactgggtcagcaa
cctaaaactgacccaaaagagaaagcaaagtcagagacaagagattggttgaacaatgtg
gtgagcgaactcgagtcgcagattgatagctttgaagctgagttggaaggactatctgtc
aaaaaaggaaagtcaaggccgcccagattgacacatcttaagacatctatcacaagacac
aaggatcatataataaagttggaattgatattgaggcttctggacaatgatgaattaagt
ccagaacaagtaaatgacgtcaaagattttctggatgattatgttgaacgaaatcaggat
gattttgacgaattcagtgatgttgatgagctctatagcacgttgccactaaatgaggtg
gagggtcttgaagatctagtaaccgctggccccctcgtcaagggtactcctctgagcatg
aagagttctgtggcagcgtcagcatctcaagttcggagcataagtctgccaacacaccat
cagagcacttctcaagagaagactgacgatacaactttaccggatagcaattctgagaca
cttccaaaaacccctccccaaaagaatggggcccttcactcagcaccatcaacacccgtt
ggggaacgtccaagttcgaatgtgcctgtcagtagtgttcctaatgcaccagttgcttta
tcaacttccgttcctgttcagacttccacagaaaggatgggaagtttgtctacagtggcg
gccaaggaagaagatgcaacaaccttgccttcccgtaaaccaacctcatctgttgctgat
gctccaccgaggggcattggtagagttaatttccccacccagcctcaactgagtcagcct
ttgtctccaagtgcagctaacggcactggtgcgacttcttcagcagctgaaattgcaaag
agaaaaataatgggagttgagagcaatgtccaacctctaacctctccgctcagcaaaatg
gtactaccaccagctgcgaagggtaatgatggaactatctctgatggtaaccctggtgat
gttgcggcaagcatcggtagagcttattcaccgtctattgtatctggtttgcagtggagg
cctgggagtccctttcagagtcagaatgaaacggtccgtggaagaactgaaatatcacca
gatcaaagggagaaattcttacagcggtaccagcaagtactatccgaaagaaacgagaag
cagttttcttcacaacagcaaaatccgcttttacagcagatgtag
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