Brassica napus (rape): 106433778
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Entry
106433778 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: putative auxin response factor 14
KO
K14486
auxin response factor
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106433778
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
106433778
NCBI-ProteinID:
XP_013730059
UniProt:
A0A078HT50
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Position
A9:complement(12090748..12095128)
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AA seq
541 aa
AA seq
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MFSLFLAIGETNNYLNDKLWKLCAGPLFDTPKIGEKLVASMDDELCQLKPIFDIPSKICC
NVFSINLKVEPSTNEIYAEVSLLPDTSDVEIPIPKNENNIQNINYFTKVLSASDTSTNGG
FVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTSGWNEFAK
GKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLTSKESMHHSVVATALNAIENKC
MFVVFYKPRSSQFIVNFDKFVDRVNNKFSIGSRFSMKFEGKDLNEIRYNGTVVGVRDFST
HWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSSNIFKSDALKHKRQLEVHEFGSK
MWAPTIYNEQMVQAMKEPSTTTXTTSCRLFGVDLMVPAITKDPVEPIVSNKKCKISKIFE
DEKVDHVQAKSRTKVHMEGVIERTVDLTIFDGYNQLIDELERLFDIKGELHMHNKWKMFF
IYNDGDMMILGDDPWPKFCNMAKEIFICSKEDVKIGIADNRFSEGDPTLTTTILPPDVNN
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttgtttctagctattggtgaaaccaataactatttgaacgataaattatgg
aagttatgtgctggacctctgtttgatactccaaaaattggagagaaactagttgcctct
atggacgacgaactttgtcaactaaaaccaatttttgatattccttcaaaaatttgttgt
aatgtttttagtatcaaccttaaggtagagcccagtactaatgaaatttatgcagaagtt
tctttgttgcctgatacatctgatgttgaaatccctattcctaaaaacgaaaacaacata
caaaacattaactatttcaccaaggtgttaagtgcttctgataccagcacaaatggtggt
tttgttttgtataaaagacatgccattgaatgtcttcccctgttggatatgtctcagcta
accccaagtcaagagataattgctaaagatatccatggtcatgaatggagttttaaacac
acttcaagaggtacaccaaaaagacatcttttcacatctggttggaatgagtttgcaaaa
ggaaaaaaattggttgctggagactcttttgtgtttcttcgaggagagaatggggaatca
cgagttggtatcagtaaagcagctcatcagcaacgcaacataccaacatctttaacttca
aaagagagtatgcaccatagtgtggttgctactgcactgaatgctattgaaaacaaatgt
atgttcgttgtgttctataagccaaggtcgagccaattcattgtcaacttcgataaattt
gtagatagagtgaataataagtttagtataggctccagattttcgatgaagttcgaagga
aaagatctaaatgaaataagatacaatggaacagtagtgggagtgagagatttctccact
cattggaaagattcagaatggcgaagtctagaagtgcaatgggatgaagctgcaacaatt
ccaagacctgataaggtatctccatgggagattgagctgttaacacattcatcaaacatt
ttcaagtcagatgctctaaaacataaacgtcaactcgaagtacatgagtttggttcaaaa
atgtgggctcctacaatctacaatgagcaaatggttcaagcaatgaaagaaccgtcaacc
acaaccnaaactactagctgcagactgtttggagttgatctaatggttcccgctataaca
aaggatccagtggaacctattgtctcaaacaaaaaatgtaagatttctaaaatctttgaa
gacgaaaaggttgaccatgtccaagctaaaagtcgtactaaggttcatatggaaggtgtc
atagaaagaactgtagatttaactatatttgatggatacaatcagttgatcgatgaacta
gaaagactctttgatatcaaaggcgagttgcatatgcacaataaatggaaaatgttcttc
atatataatgatggagatatgatgattcttggagacgatccctggccaaaattttgtaat
atggctaaggaaatattcatatgttcgaaagaggatgtcaagatagggatagcagataac
agattctccgaaggtgatccaacattaacaacaacaatcttaccaccagatgtcaacaac
acttag
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