KEGG   Brassica napus (rape): 106434003
Entry
106434003         CDS       T04128                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bna03016]
    106434003
Enzymes [BR:bna01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     106434003
Transfer RNA biogenesis [BR:bna03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    106434003
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4
Other DBs
NCBI-GeneID: 106434003
NCBI-ProteinID: XP_013733370
UniProt: A0A078HTS7
LinkDB
Position
A1:complement(236104..239150)
AA seq 646 aa
MSDVVAEGDAKPTKQFSVYEATSEELIERSMAPIKKEFLCPPPSRSLKQSDVKAPHPSLV
QEKKSKRQLKRERREKCAINLCPQVSRTEDVDSCQYKEKCRFNHDIQAFKAQKPDDIEGQ
CPFVASGIKCQYGLSCRFFGTHKDLSGISDAEINFFNKETQRLLWKNNMTFPKADAKLKS
LGLMGHAKKSNVAQENDAEKPLDGAQTNEDVDIPGPLETEDVRPTKKAKSDETSKLGHII
DGVMNVDDETEKTGNSTSKAKIEDDEDIIKVIETDGSLKSHPREKKKLIDFRDKLYLAPL
TTVGNLPFRRLCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGSFPD
TVSRAVELIDRECTVDFIDINMGCPIDMVVNKSAGSALLNKPLRMKNIVEVSSSIVETPI
TIKVRTAFFEGKNRIDSLISDIGDWGATAVTIHGRSRQQRYSKSADWDYIYQCTKNASPN
LQVIGNGDVYSFLDWNKHKSDCPELSSCMIARGALIKPWIFTEIKEQRHWDITSGERLNI
FKDFVRFGLQHWGSDTKGVETTRHFLLEWLSYTFRYIPVGLLDVIPQQINWRPPSYFGRD
DLETLMMSESAGDWVRISELLLGKVPEGFTFAPKHKSNAYDRAENG
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgtccgatgtagtagcggaaggagatgcaaagccgacgaagcagttcagtgtgtatgaa
gcgacatcggaggagcttatagaacggtcgatggcgcctataaaaaaggagttcctatgt
cctcctccgagccgttccctaaagcaaagtgacgtgaaggcgcctcatccgagcttagtc
caggagaagaaatcgaaacgacagctcaaaagagaacgccgcgagaaatgtgcgataaac
ctgtgtccgcaggtttcgagaacagaagacgttgattcctgtcagtataaagagaaatgc
cgctttaatcatgacattcaagctttcaaagctcagaaaccagatgatatagaggggcag
tgcccatttgtggcctctgggatcaagtgtcaatatggtttatcatgcagattctttggc
acccacaaagatttatctggaatttctgatgccgagattaactttttcaacaaagagaca
cagaggcttttatggaaaaataacatgacttttcccaaggcagatgccaaacttaaatcc
cttggccttatgggccatgccaaaaaaagcaatgtcgctcaagagaatgacgcagaaaaa
cctctagatggtgctcagacaaatgaagatgttgatattcctggaccattagaaactgaa
gatgttcgtcccacgaaaaaggccaaatctgacgagacttctaaactaggacacattatt
gatggggtgatgaatgtagacgatgaaacggaaaagaccgggaattctacttcaaaagcc
aagatagaggatgacgaggatatcatcaaagttattgaaaccgatgggagcctaaaatcg
catcctcgcgaaaagaaaaagcttattgattttagggataagttgtaccttgcaccccta
acaactgtgggcaatcttcccttcagaagactttgcaaagttttgggagctgatgtgact
tgtggtgagatggccatgtgtacaaatcttttgcagggccaagcttccgaatgggctctg
cttagaaggcattcatcggaagatctgtttggtgttcagatttgcggttcttttccagac
acggtgtctcgtgcggttgagcttatagatcgagaatgcacggttgatttcatagacatc
aacatgggctgcccgatagatatggttgtgaacaaaagtgctggttcagctcttctcaac
aaaccattacgaatgaagaacatcgtggaggtctcttcttccattgttgaaacacctatc
actatcaaggtacgaactgcattttttgagggtaagaaccggatagactcgttaatttca
gatattggggattggggagccactgcagtgacgattcatgggcggtcaagacaacaacgt
tatagcaagtctgcggattgggactatatataccagtgtaccaaaaacgcttcccctaac
ctacaagttataggaaatggagatgtgtactcttttttagactggaacaaacacaagtct
gactgtcctgagttgtctagctgcatgattgctcgcggagcactgatcaagccttggata
tttactgaaattaaagagcaacggcactgggacattacctccggggaaagactcaacatc
ttcaaggactttgtacgttttggtcttcaacattggggatccgatacaaaaggagttgag
acaactaggcatttcttactggagtggctaagctacacgtttaggtacatacctgtaggt
ctgctggatgtgatcccgcagcaaatcaactggcgtccgccttcttactttggtcgtgat
gatctcgagactctcatgatgtctgaatctgcgggtgactgggtgaggatatcggaattg
ctgcttggaaaggttccggaaggcttcacgtttgcccccaaacacaaatccaacgcttat
gatcgagctgaaaatggctaa

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