Brassica napus (rape): 106434277
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Entry
106434277 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2 isoform X1
KO
K12191
charged multivesicular body protein 2A
Organism
bna
Brassica napus (rape)
Pathway
bna04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106434277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106434277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bna04147
]
106434277
Membrane trafficking [BR:
bna04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
106434277
Exosome [BR:
bna04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106434277
Exosomal proteins of other body fluids (saliva and urine)
106434277
Exosomal proteins of colorectal cancer cells
106434277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
GAS
PIN_12
DUF4400
Flagellin_C
MerR-DNA-bind
Motif
Other DBs
NCBI-GeneID:
106434277
NCBI-ProteinID:
XP_013730568
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All DBs
Position
A9:13504612..13508259
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AA seq
223 aa
AA seq
DB search
MNIFRKKATPKDALRTSKREMSVATRGIEREISSLQLEEKRLVAEIKKTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK
QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS
APKGRIATKTAAPPPPATTTNSNSSESSEVDELEKRLASLRRI
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaacattttcaggaagaaggctactcccaaagatgctcttcgcaccagtaagagagaa
atgtctgtggctacacgaggtatcgagcgagagatttcatctcttcagctggaggagaag
agactagttgctgaaatcaaaaaaactgctaaaactggaaacgaggcggcgacaaagatt
ttagcacgtcaacttgtaagattgaggcaacagattacaaacttacagggaagccgtgct
caaatcagaggtgtaacgactcacacacaggctctctatgccagcacttccatttcttct
ggtatgaaaggtgcaaccaaagctatggttgcaatgaacaagcaaatggcaccaacgaaa
caagccaaagtgattaaggatttccagaaacagtctgcacagctagacatgacgatagag
atgatgtcagaggcaattgatgaaacgcttgacaaagatgaggctgaagaagaaacagaa
gacctcactaaccaagttcttgatgagattggtgttggagttgcatctcagttatcttca
gctccaaaaggtcggatcgctacaaaaaccgcagctcctcctcctcctgcaactactacc
aacagcaacagctctgaatcaagtgaagtggatgagcttgagaagaggttggcttcactg
cgaagaatctga
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