KEGG   Brassica napus (rape): 106434303
Entry
106434303         CDS       T04128                                 
Name
(RefSeq) serine/threonine-protein kinase ATM isoform X1
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
bna  Brassica napus (rape)
Pathway
bna03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    106434303
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:bna01001]
    106434303
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bna03032]
    106434303
   03036 Chromosome and associated proteins [BR:bna03036]
    106434303
   03400 DNA repair and recombination proteins [BR:bna03400]
    106434303
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     106434303
Protein kinases [BR:bna01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   106434303
DNA replication proteins [BR:bna03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    106434303
Chromosome and associated proteins [BR:bna03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    106434303
DNA repair and recombination proteins [BR:bna03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    106434303
SSDB
Motif
Pfam: TPR_ATM PI3_PI4_kinase FAT FATC TAN
Other DBs
NCBI-GeneID: 106434303
NCBI-ProteinID: XP_048608836
LinkDB
Position
C3:complement(44053789..44080446)
AA seq 3024 aa
MITSRDVHEVVWKLSSDKAKTREDGVKLLNTWLEGDMSINFCSFLSHNTAKLKLDQIPNA
ETWPFLVKNLLQCVSMEVSGSKRRIPKPTFAKALRVVIQRAEETKFPGVLSPLLSMAKTI
FTHIHDILSNTPSFHSEYGIILRHLLEIKEYRFQMRKRTYSNLVMLYIERAEAGFWEKNS
GQHSQKEEAFRCILTLQSLLENPPGDFSDDIRKEIVNGLIHIFSSARDEEKLSRKLIECV
NSFLLKDGPNIGSLSLEIHNAVQQFVFRCWLTTHDKNLKEILAFYGRLQLNLTRGSSESS
SLVEQLLNVVTSELDLGSSSSSASWGDSTKDGTLSSYQNSLVELAAHVLYRAVVNTTRSS
LSEKRARRQHITLRLVEALTEGKWLWCAAFGCLIRTHCTRINKDLLIYWFEAICTNFQRL
VEDASMRRSYDGLLWTLRSLQELSSGLLLPTATIDISKSAVSSSELDRGWQLIWSSLIHG
LATFSSMTVIVDAVLVLLGSIISNNHINVGILPQEVWDHQLFRHIPSEPALYFIACYFSR
MGCQGNLQDDLHLRRNLLRAVCGPLSLKGPLALNERMIRLLPAAALALCAGFTTTLPLPK
EHLPTPPSWDACEVVNDVKMDDAEQERKFGLFECSVEVLTRVYSNSIKISSYRVPDGVQL
PLVLRDPLLNDMEIYFLSLIPEDSEKGPLSDIFMGCSLLCHFMHGSYTTRKGKGSTSFFL
KACQYLLESLDYAVEAVLKSLYDFQRLGPLGFGSDFNEKSSIIVSLRSLTSSPVFSNRRD
QNLLATSYDTVFHSLEDLLRSFAKVYGEYTEHSWNTQPDTVTSKSLALDPPEVGRIVDMD
LDLDVDTKEIDLITAGGKAVAGGPVSTGNWKLGMISLISCFSPVLQFPTWDVLYSIMEKE
CDPKVLENILYHLCQLSCLTSMPKVYDLVIFLDDMLNKQVKNKRNCLNIVTALHVLLQNL
LSGMDSSGLKPNSELSLLKGESCQIFVQLGAMVNKVSECGLMGWFGRVRLISCICNFVLL
NPRIGQTMIERLLLMLNDSDYRVRFVLARQIGLLFQTWDGHEALFQDICSSFGIILVTSS
KENLVTARDVLAAGPQPRPKMETVIITLMHLAYHSENIELQAVFMMCAVSAIDPCQSREL
IIAALDNLSAQLHYPSRFKYLEELLGPILFFWIACGVSLAALVETSQLFILNAEPKYFIH
FCSHWLLPALLLHEDNTNLDWVAKMASKPASVLVKENFVPIFSIGMGLHCSKTSECEKGA
LVLQNSILYVGQITETERDKLIKRNMVSIVSFILSRASSSPEPPVPAFSRDTISRAIQTI
VDGFLETADYHKNAAVIDNINVFRPDRVFMFITEIHYKMSAACHHRHTRHHLAALEELTI
ILGHRALVPSSLNYIFNLVGQFIVSPSLQDQCCSIASCLLDSFRSNPAKEIVSVLGDQLQ
FLVSKLVTCCIDAEANSKVSGSKSSQLVNLLHKLIANSESSLHEDIRDLEPLPDMEIFRV
IRESHIRRCEGYSPRNHLLKCARRSCYLPPRFLSWSLQALHHKLIATEASQGESNLETGD
SFWHSDDEIVNAVWTLVRVSASDEADSMRLLASDFLSRVGIGDPHTVVFHLPGELGSMND
LQFVSHNKGSKVSSFTENGVSDETLISLLKILKKYLLDDSVKIIDVTSQTLRGILSTERG
QQALSSIDSCERSLIEVHGRGVNLDTVEKILLDSEKQYKALSAENFSLEKAEVWSTDNKN
FDGWICQLVYCMISLCEDVPIRLCQNIAMLKAEISELLFPSVIVSLAGRVGTDINLHELI
TSQVKEHIFVDSNKLTKSKQVMLNTLNELRMCYVLERSTFSGQTKREKNTKHSNYSSRSS
SSAAKIRDVETANGMAASITANWDKAYWLSIDYLVAARSAVVCGAYLTAAMYVEYWCEEK
FGSLSLGDPDFSYHDMLPDHVEILVSAITRINEPDSLYGVIHSNKLSAQITTFEHEGNWS
RALEYYDLQARSQKIVVPGSLPENQGVEHFQPTTSAQHSVFGEGEVQRQPFKGLIRSLQQ
TGCMHVLDLYCRGLTSREGSFQYDPEFIELQYEAAWRAGKWDFSLLYPQTHSTSMQHVKN
NNYHENLHGCLRALHEGDCNGFHGKLKDAKKELVLSISRASEESTEFIYSAVVKLQILYH
LGLVWDLRWTTSSHESMHGYPVKQMACADPVTPTMEQFSWLNKDWISITTQTQFHMNLLE
PLVAFRRVLLQILGCEQCTMQHLLQSASLLRKGSKFSHAAASLHEFKFLCAKSDGGQSVP
DWLGRIEEAKILHAQGRHEVAISLANYILQNYQLKEEASDIYRVIGKWLAETRSSNSRTI
LDKYLKPAVSLAKNPSSEISKRLVDRQSQTWFHLAHYADALFKSYEERLSSSEWQAAMRL
RKHKTKELEVLIKRYKSSKKGEQSDYSLKIQELQKQLTMDKEEAEKLQVDRDNFLKLALE
GYQRCLQIGDKYDVRVVFRQVSMWFNLASQKDVIDNMLSTISEVQSYKFVPLVYQIASRL
GSSRDESGSNSFQSALVSLLRKMAIDHPYHTILQLLALANGDRIKDNQRSRNSFVVDIDK
KVAAEHLLQDVSQHHGPMIRQMKQLVDIYIKLAELETRREDTNKRVPLPREIRSVKQLEL
VPVVTATIPVDRSCQYNEGSFPSFRGLSDSVTVMNGINAPKVVECFGSDGRKYKQLAKSG
NDDLRQDAVMEQFFGLVNTFLHNNRDTWKRRLAVRTYKVVPFTPSAGVLEWVDGTIPLGD
YLIGSSRAGGAHGRYGIGNWNYSKCREHMSSAKDKRKAFMDVCTNFRPVMHYFFLEKFLH
PADWFVKRLAYTHSVAASSMVGYIVGLGDRHAMNILIDQATAEVIHIDLGVAFEQGLMLK
TPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWA
LSPLKALQRQKETEDYDGVNLEGLQEEFEGNKDAARALMRVKQKLDGYEGGEMRSIHGQA
QQLIQDAIDTDRLSHMFPGWGAWM
NT seq 9075 nt   +upstreamnt  +downstreamnt
atgattacttcgagggatgtccatgaggtcgtctggaagctctcgtcggataaagccaag
actcgtgaagatggagtcaagttattgaacacgtggctcgaaggagatatgtcaattaac
ttctgtagctttctttcgcataacacagccaagcttaagttggaccagattccaaatgct
gaaacgtggccctttttggttaaaaatctccttcaatgtgtatcaatggaggtgtcaggt
agtaagagacggatacccaaaccaacttttgccaaggcgcttcgggttgttattcagaga
gcggaagaaaccaagtttcctggtgtactctctcctttgctatctatggccaaaaccatc
tttacacatatacatgatattttgagcaatacacctagctttcattcagagtatgggatc
atactccgccatcttttggaaattaaggaataccgtttccaaatgaggaagcgtacatat
tccaatttggtgatgttatacatagaaagggcggaagcagggttttgggagaaaaacagt
ggtcaacatagccagaaggaggaggcgtttcgttgtattcttacgcttcagtcactttta
gagaaccccccaggagatttttctgatgacattcgaaaagaaattgtgaatggtctcatt
cacatcttctcttctgcaagagatgaagaaaagctctcacgcaagcttattgaatgtgta
aattcgttcttgctcaaggatggtcctaatataggctccttgtcattggaaattcataat
gccgtccaacagtttgtgttccgttgctggttaacaacccatgataagaaccttaaggag
atacttgctttttatggaaggctacagctaaatttgacaagaggatctagtgaatctagt
tctctggtggaacaacttttgaacgtggttactagtgaactggatcttggtagttcatca
agttctgcatcatggggtgattcaaccaaggatgggacattgagcagctatcagaatagc
ttggttgagttggctgcacatgtgctctaccgggcagttgtcaatactactagatcatca
ctgtcagagaaacgagctcgaaggcaacatattacattgcgtcttgtggaggcacttact
gaaggaaaatggctgtggtgtgctgcttttggttgtctaattcggactcattgtactcgc
atcaacaaggatctccttatttactggtttgaagccatctgtacaaactttcaaagactt
gtggaggatgctagtatgagacgttcttatgatggtctattatggactttgaggagtttg
caagagctatcttctggtttgttacttccaactgcaactatcgacatatcaaagtcagct
gtttcctcaagtgagctagatcgtggttggcaattaatctggagttctttgatccacgga
ctagcaacattcagcagcatgaccgtaattgttgatgctgtcttggtgctccttggatca
attatttcaaataaccacataaacgtggggattctacctcaagaagtgtgggatcaccaa
ttattcagacacataccctctgagccggccttgtacttcattgcatgttacttttcacgt
atgggttgccagggaaacctgcaagatgatctacatctacgacgcaatctccttagagca
gtttgtggcccccttagcttgaagggtccattggcactgaatgagcgaatgattcgcctt
ctaccagcagctgctttagccctatgtgctggtttcacaacgacacttccattacctaag
gaacatctcccaacaccacctagttgggatgcctgtgaagtggtgaatgatgtgaagatg
gatgatgctgaacaagaaagaaaatttggactgtttgaatgctctgtagaggttctaaca
agagtttactcgaattctatcaagatctctagttaccgagttcctgatggagtacaacta
cctctagtactaagagatccattgcttaatgacatggaaatctattttcttagccttatc
ccagaggacagtgagaaaggaccactttctgacatatttatgggatgttctctgctgtgt
cattttatgcatggttcttatacgacgaggaagggtaagggaagcacttctttcttctta
aaagcatgccagtatttgttagaaagcctggactacgctgttgaagcagttttaaagagc
ctctatgattttcaaaggcttggacccttggggtttggctcagattttaatgagaaaagt
tctataatagtttcgttgaggtctcttactagttctcctgtcttcagcaacagaagagac
caaaatcttcttgccactagttatgatactgtatttcactccttagaggaccttttacgg
tcgtttgctaaagtttacggagaatatactgagcactcatggaatactcaacctgacact
gttacttcgaaatcgttagcacttgatcccccagaagttggcaggattgtggatatggat
ttggatctagatgtagacactaaagagatagatcttataactgccggtggaaaagctgtt
gccggtgggcctgtttctacggggaactggaagttgggcatgatatcgcttatctcatgt
ttttctccggtacttcagtttcctacatgggatgttttatatagtattatggagaaggaa
tgtgatcctaaggttttggaaaatatactctatcatctatgccagctttcatgcttgact
tctatgccgaaggtttatgatttggttattttcttggatgacatgctcaacaaacaagta
aagaacaagcgtaactgtctcaatatagtcactgccttacatgttttactgcaaaatttg
ttatcggggatggattcttctggactcaaaccaaactcggaattgtctcttctgaaaggg
gagagttgtcagatctttgtccaacttggcgcaatggtgaataaagtttctgaatgtggt
ctcatgggctggtttgggcgtgtgaggcttatcagctgtatatgtaattttgtcttgctt
aatcctcggattggtcagacaatgattgagcgacttttgctaatgctaaatgactctgat
tatcgggtgcggtttgtcctggcaagacaaattgggcttttattccagacatgggatggt
catgaggcattattccaagatatttgctctagctttggtattatactggtaacctcctca
aaggaaaatcttgtcactgcaagagatgttttggctgctggtcctcagccacgcccaaaa
atggagactgtcatcattactctgatgcaccttgcatatcacagtgagaacatagagttg
caagctgtttttatgatgtgcgctgtttcagctatagatccttgtcagagtagggaatta
atcattgctgcacttgacaatctatcagcacaactccattacccatctaggttcaagtac
ctggaagaactcttgggcccgatcctctttttctggattgcatgtggtgtcagtttagct
gctcttgttgagacaagtcagctgttcattctaaatgctgaaccgaaatatttcatccac
ttttgttcccactggctacttccagctcttctgctgcatgaagataatactaaccttgat
tgggtagctaagatggctagcaaaccggcgtctgtgttggtcaaagaaaattttgtgcct
atcttttcgataggtatgggattgcactgtagtaaaacatcagaatgtgaaaaaggtgca
ttggtgcttcaaaattcgatattatatgtgggtcagatcaccgagactgagagggataag
ctcattaaacggaatatggtgtctattgttagttttattttatcacgtgcttcgtcttca
ccagaaccccccgttcctgctttttctcgtgacaccatttcacgagcaattcaaacaatt
gtggatggttttctggaaaccgctgattatcataagaatgcggcggtcattgataatatc
aatgtttttcgcccagatagggtgttcatgttcatcacagaaatacactataaaatgtca
gctgcatgccatcatcggcatacgcgtcatcacctggccgctctagaagagcttactatt
attcttggtcatagagctttggttccaagttccttaaattatatattcaatcttgttgga
caatttatcgtctctccctcattacaagaccagtgttgtagtatagcttcctgtttactg
gattcgttcagaagcaatccggccaaagaaattgttagtgtactaggtgaccaactccag
tttttggtctcaaaactagttacatgctgcatcgatgctgaagcgaactccaaagtttct
ggttctaagtcatctcaacttgtaaatttgctccacaagctaattgctaattcagaatca
tctctccatgaagatataagagatttagaaccattgcccgatatggaaatttttcgtgtc
attcgcgaatcacacatcaggagatgcgaaggttactcaccaaggaatcatctgttgaag
tgtgccagaagatcatgttatcttccaccaagattcctttcctggagtctccaagcactg
caccacaagctcatagctactgaagcttctcaaggagagtcaaatctcgaaactggagat
agcttttggcattctgatgatgaaattgtaaatgctgtttggactcttgtccgcgtgtct
gcttcagatgaggcagatagtatgagattgttggcgtcggattttctttccagggttggt
attggggacccccacaccgttgttttccatcttcctggggagttgggatccatgaatgat
cttcaatttgttagccataataaaggatcaaaagttagttcttttactgagaatggcgta
tccgatgaaacccttatttcgctgttaaagattctgaagaagtatcttttggatgactct
gtaaagatcattgacgtaacgtctcaaacccttcggggaattctttccactgaaaggggg
cagcaagcattatcttctatcgattcgtgtgagagatctttgattgaggtacatggcagg
ggtgttaaccttgacactgttgaaaagatcttactggatagcgaaaagcagtacaaagcg
ctgtcagctgaaaacttttcactggagaaggctgaggtgtggtccacagataataaaaac
ttcgatggatggatttgtcagcttgtgtactgtatgatctcgttatgtgaggatgtccca
ataaggttatgccagaatatagcaatgctgaaagctgaaatttctgagcttttgtttcca
agtgttattgttagtcttgcaggaagggtagggactgatatcaatttacacgaactaatt
acctcacaggtgaaagagcacatcttcgtcgattcaaacaagctaacaaagtcgaagcag
gtcatgttaaataccctgaatgaactgcggatgtgttatgtccttgaaagatcaactttt
tctgggcaaactaaaagagaaaagaatactaagcattctaactacagttctagatctagc
tccagcgctgctaagattagagatgtggaaacagctaatggtatggcagcgtccataact
gcaaattgggacaaggcatattggctttccattgattatcttgttgctgccagatcagca
gtagtttgtggtgcatatttgaccgccgccatgtatgttgagtactggtgtgaggagaaa
tttggcagtctaagcctcggagatcctgatttttcttatcatgatatgttaccggatcac
gttgagatacttgtgtctgcaataacaagaataaatgagcctgacagcttgtatggggtt
atacattccaacaagttgtctgctcaaataaccacatttgagcatgagggaaactggagt
agagcacttgagtactatgacttgcaagcacgttcacagaaaatagtggtgcctggtagc
cttcctgaaaaccaaggggtggaacattttcagccaacaactagtgcacaacattctgtt
tttggcgaaggggaggtccagagacaacctttcaaagggctcattaggtctttgcagcag
acaggctgtatgcatgttctcgatctgtattgccggggcttgacttcccgagaaggctcc
tttcagtatgatccagagtttatcgaattgcagtatgaggctgcatggcgtgcaggaaaa
tgggatttttctttactctatccacaaacgcactctacatctatgcaacatgtcaagaac
aataattatcatgaaaatctgcacggttgtttgagagctttgcatgaaggggattgcaat
gggtttcatggaaaactgaaggatgctaagaaggagcttgtattgtccatttcccgtgca
agtgaagaaagcactgaatttatatactcggcagtagtgaaacttcagattctttatcat
cttggactagtttgggatcttcgctggacgacatcttcacatgaaagtatgcatggctat
ccagtcaaacaaatggcatgtgcagaccctgtgacgccaacaatggagcagttttcttgg
ctgaataaggattggatctctattactacacaaactcagttccacatgaatttgttggag
ccattagtcgcatttaggcgagtcctcctccaaatcttgggatgtgagcaatgtaccatg
cagcatcttttgcagtctgcttccttacttcgcaagggatcaaagttttctcatgcagct
gcgtctctgcatgagttcaagttcctttgtgcaaaaagtgatggaggacaatctgttcca
gattggcttggaaggattgaagaggcgaaaatattacatgcccaagggcggcatgaagtt
gccatcagtctggcgaactacatcttacaaaattatcaattaaaagaagaggcttcagat
atataccgtgtgattgggaagtggctagcagaaaccagatctagcaactctagaacaatt
ttagacaagtacctcaagcctgcagtttcgcttgccaaaaacccgagttccgagatcagc
aaaagattggtagatagacaaagccagacttggtttcatctggcccattatgcagatgct
ctgtttaaaagttatgaggagagactctcttccagtgaatggcaagctgcaatgcggcta
cgaaaacacaagacgaaagagttggaggtgcttattaaacggtataagagttcaaagaag
ggggaacaatctgactattcactgaagattcaagagctgcagaagcaattaacaatggac
aaagaagaagcagaaaagttgcaggttgacagggataactttctgaaacttgcgttggag
gggtatcaacgttgcctgcaaattggtgacaaatatgatgtccgagtggtctttagacaa
gtatccatgtggtttaatcttgcctcccagaaagatgttattgataacatgttgagcacc
attagtgaggttcagtcttacaaatttgtaccacttgtttatcagattgcttcaaggttg
ggtagctctagagatgaatcaggatctaacagttttcagtctgctctggtttcacttctc
agaaaaatggccattgatcatccataccatactatccttcagcttctggctttggcaaac
ggtgacagaatcaaggataaccaacgcagtagaaactctttcgtggttgatatagataaa
aaggttgctgcagagcatcttttgcaggatgtatcacagcatcatgggcctatgattaga
caaatgaaacaactggttgatatctacatcaagcttgcagagcttgaaacgaggagagag
gatactaataaaagggtaccactgccaagagaaattcgtagtgtgaaacaattggaactt
gtacctgtagtgactgctacaattcctgttgaccgtagctgccaatacaatgaagggtcg
ttcccttctttcagaggtttatcagattctgttacagtgatgaatggtattaatgctcca
aaagtagttgaatgctttggctctgatggtcgaaaatataagcaacttgcaaaatctggc
aatgatgacctcagacaagatgctgttatggaacaattttttgggctcgtcaataccttt
ctacataataatcgggacacatggaagagaagattagctgtacgcacatacaaggttgtt
ccttttaccccaagcgctggtgttcttgagtgggttgatggcacaattccacttggagat
tatcttataggaagctcaagggctgggggcgctcatggtcgttatggcattggaaactgg
aattattcaaaatgccgagaacatatgtcgagtgcaaaagacaagcgcaaagccttcatg
gatgtctgcacaaacttcaggcctgtcatgcattactttttcctggaaaagttcctgcat
cctgctgactggtttgtgaagaggcttgcgtatacacatagtgttgcagctagttcaatg
gttgggtacatcgttggtcttggtgaccgccatgccatgaatattttaatcgatcaagct
acagcagaagttatccacatagatcttggagttgcctttgaacaaggattaatgctcaag
actcctgaacgggtccctttcaggctgacaagagatataattgatggaatgggtatcaca
ggagtggaaggcgttttcaggagatgttgcgaagaaaccttgtctgtgatgcgaacaaat
aaagaggccctccttacaattgttgaagttttcatacatgatcctctatataaatgggca
ttgtcccctttaaaagctttgcaaagacagaaggaaactgaagattacgatggcgtgaac
ttagaaggattacaagaggaattcgaaggtaacaaggatgctgcacgtgccttgatgcgt
gtcaagcaaaaacttgatggctatgaggggggtgagatgagaagcatacatggccaggca
cagcaactaatacaagatgcgatcgacacagatcgtttatcccatatgttccctggctgg
ggagcctggatgtag

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