Brassica napus (rape): 106434438
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Entry
106434438 CDS
T04128
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bna01002
]
106434438
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106434438
Enzymes [BR:
bna01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106434438
Peptidases and inhibitors [BR:
bna01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106434438
Ubiquitin system [BR:
bna04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106434438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
106434438
NCBI-ProteinID:
XP_013730767
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All DBs
Position
C1:4306866..4310074
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AA seq
579 aa
AA seq
DB search
MSDKKVFVFGSFTEHETRSLLEQQKPIKAPQNHKEKSVGSIQFGSFNLVTGSSPVNTNGE
LKKAQAADGVVKSRPSSSHKEDSAVSQKRVDAPRPSSSHKEDRSIQSAVSQKRLDASRPS
SSDKVAKLPVKHSSGVPEHVVENGTIKEVSERKPHNNGVAVKAGLEKLCVSDGESDALYK
ATSSKFQALDSDILLSDSSPASIPRKNNQMVVHTEQPAPPVKDFTPRGLINAGNLCFLNA
TLQSLLSCSPFVQLLQGIQLQDIPKTESPTLAAFSEFISELDAPSSSTFRNNVTVVESGR
PFTPAMFETVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLRDESPRLTGSK
SSVLSSASDDDEWETVGPKNKSAVTRTQSFVPSQLSDIFGGELRSVVKAQGNKDSATVQP
YLLLHLDIHPEAVCTIEDALHLFSAPEDLEGYRASVTGKAGVVSARKSIKIQKLSKIMIL
HLMRFSYGNQGSTKLHKPVHFPLKLNLGRYLLASPSNGLKYELVATITHHGRDPSKGHYT
ADARRKNNQWLRFDDASVTAIGTKQVLHDQAYVLFYKQV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaagaaggtctttgtgtttggatcctttacagaacatgaaacaaggtcatta
cttgagcagcagaaacccatcaaggctcctcagaatcataaagaaaagtctgtagggagt
atacagttcggctcctttaatctcgttaccggaagctctccagttaacactaatggcgag
ttgaagaaggctcaggctgctgatggagtagttaagtctcgaccctccagctctcataag
gaagattctgctgtgtctcaaaagagagtcgatgctcctagaccttccagctctcataag
gaagataggagtattcaatctgctgtctctcaaaagagactcgatgcttctagaccttcc
agctctgataaagttgcaaaactccctgtgaagcactcttcaggcgttccggagcatgtg
gtagaaaatggaacaatcaaagaggtctctgaaagaaaacctcacaacaatggtgtggcg
gtgaaggctggtttggagaagctgtgtgtatcagatggtgaaagtgatgctttgtataaa
gctacgagctcaaagttccaagcccttgacagcgatattttgttaagtgattcttcacct
gccagcataccaagaaagaataaccagatggtggttcatactgaacagcctgctccgccc
gttaaagacttcacaccaagaggattaataaacgctggaaacttgtgcttcctcaatgca
acattacagtctttactctcctgctctccgtttgttcagctcctccagggaatacaactt
caagacattccaaagactgagtctccaacattagctgcattctccgagttcatatctgaa
ttagatgccccaagcagttcaaccttcagaaacaatgttaccgttgttgagtcgggtaga
cctttcacacctgccatgtttgaaacggtccttagaaactttactccggatgttctcaac
aacatgtctggccgcccaaggcaggaagatgctcaggagtttttgagctttataatggac
caaatgcacgatgagttgctgaaactcagggacgagtcccctagactcactggttccaag
tcatctgttctttcttctgccagcgatgatgatgaatgggaaacggttggacccaaaaac
aaatctgctgtgacaagaacacaaagctttgttccttctcagctcagtgatatcttcggt
ggggagctcagaagcgtagtgaaggcacaagggaacaaagactctgctactgtgcagcca
tatctcttactccacctggatattcacccggaagctgtgtgtacaattgaagatgcattg
catttgttttctgctccagaagatcttgaaggctatcgagcctctgttactggcaaggct
ggtgtagtgagtgctagaaagtcgataaagatacagaagctctcaaagataatgatactg
caccttatgcgttttagctacgggaaccaagggagcactaaactccataaacctgttcac
ttccccctcaagctcaacctaggccgctaccttcttgcttctccgtccaacgggttgaaa
tatgagcttgtggcaacgattactcaccacggaagggatccctcgaaaggccactacacc
gcggatgctcgaagaaagaacaatcagtggcttaggttcgatgatgcgtctgtgactgct
atagggacaaagcaggttttgcacgaccaagcctatgttctgttctacaaacaagtgtga
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