Brassica napus (rape): 106434510
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Entry
106434510 CDS
T04128
Name
(RefSeq) double-strand break repair protein MRE11 isoform X2
KO
K10865
double-strand break repair protein MRE11
Organism
bna
Brassica napus (rape)
Pathway
bna03440
Homologous recombination
bna03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106434510
03450 Non-homologous end-joining
106434510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bna03032
]
106434510
03400 DNA repair and recombination proteins [BR:
bna03400
]
106434510
DNA replication proteins [BR:
bna03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
106434510
DNA repair and recombination proteins [BR:
bna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
106434510
BRCA1-C complex
106434510
NHEJ (non-homologous end-joining)
MRX complex
106434510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
Motif
Other DBs
NCBI-GeneID:
106434510
NCBI-ProteinID:
XP_013730838
LinkDB
All DBs
Position
A10:9391348..9396401
Genome browser
AA seq
715 aa
AA seq
DB search
MSREDLSDTLRILVATDCHLGYMEKDEIRRHDSFKAFQEICSIAEDKQVDFLLLGGDLFH
ENKPSRTTLVKAIEILRRHCLNDKPVHFQVVSDQTVNFQNAFGHVNYEDPHFNVGLPVFS
IHGNHDDPAGVDNLSAIDILSACNLVNYFGKMNLGGSGVGQISLYPILMRKGSTTVALYG
LGNIRDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFLP
RFLDFIVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYR
PTKIPLTSVRPFEYTEIVLKDEDDIDPNDQNSILEHLDKVVRDLIEKASKKAVNRSDIQL
PLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKKGQREGTIDDSERLRPEE
LNQQNIEALVAESNLKMEILPVNDLDVALQNFVNKDDKLAFYSCVQYNLQETRGKLAKDS
DAQKFEEDDLILKVGECLEERLKDRSTRPSGSSQFLSTGLTSENLTKRSSGIANASFSDD
EDTTQISGSVPATRGRRGSSTGTSRGRAKAPTRGRGRGKASSAMKQTTLDGSLGLRQSQR
SASASFKSASTIVEDDVDSPSSEEAEPEDLNQVDSSSEEEENTRGKGRKRQATTKRGRGR
GTVTSKRGRKNESSSSLHRLLSSKDEDEDEDDEDIEKKLNRSQPRVTRNYGALRR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagaggatttgagtgatactcttcggatacttgttgcaactgattgccacttg
ggctacatggagaaggatgaaataaggcgccacgattccttcaaggcttttcaagagatt
tgctctattgctgaggataaacaggtggacttcttactccttggaggtgatcttttccat
gagaataaaccctctcgaactacgcttgttaaagccattgagattcttcgtcgccattgc
cttaatgataaacccgtccactttcaagttgtcagcgaccagactgtcaattttcaaaat
gcgtttggtcatgtaaattatgaggatccacacttcaatgtaggcttgcccgtctttagt
attcatggaaaccatgacgatccagctggagtggacaacctttctgcaattgatatcctc
tcagcatgcaacctcgtgaattattttggaaagatgaatcttggtggttcaggtgttggc
cagatttctctctaccctatacttatgaggaagggttcaacaactgtggctctctatggt
ttaggaaacatcagggatgaacgtctcaacagaatgtttcagaccccacacgctgtccaa
tggatgaggcctgaagttcaagaaggatgtgacgtttctgactggttcaatattctggtg
cttcatcaaaatagggtgaaatcaaaccccaaaaatgcaataagcgagcactttcttcct
cggttcctcgacttcattgtgtggggccatgagcatgaatgccttatcgacccccaggag
gtatctggaatgggcttccacatcacacaaccaggatcttctgtggcaacatcactgatt
gatggggaatcaaagccaaagcatgttcttctcttagaaatcaagggcaatcaatatcgt
cctacgaagatacctttgacatctgtgaggccttttgagtatacagagattgttttaaag
gatgaagatgatattgatcccaatgatcaaaactcaattctcgaacacttggataaagtg
gtcagagatctaatagaaaaagcaagcaaaaaagctgtcaacagatcagatatccagctc
cccttggttcgaatcaaggtagattactctggatttatgacgataaatcctcaaagattt
ggacaaaaatatgtgggaaaggttgcaaatccccaggacattttaatattctccaaagct
tctaagaaaggtcaacgcgaaggcaccatcgatgattctgagcggctccgtccagaagaa
ctgaaccagcaaaatatagaagcactagtagctgaaagcaacctgaaaatggagatcctt
ccagttaacgatcttgacgttgctcttcaaaattttgtgaacaaggatgataaactagct
ttctactcatgcgttcagtacaatcttcaagagactcgtggtaaacttgcaaaagattca
gatgcccagaaatttgaggaggacgatctgattcttaaagtgggagagtgcttagaggaa
cgcttgaaagataggtcaactcgacccagtggttcctcacagtttttatccactggattg
acatcagagaatttgacgaaaagaagcagtggcatcgcgaatgcttctttcagtgatgat
gaagacacgactcagatctctggttcagtgcctgccactagaggacggagaggttcatcc
actggtacatctcgtggcagagctaaagccccaaccagaggaagaggccgaggcaaggcc
tcaagtgcgatgaagcaaaccactcttgatggttctcttggtttgcgccagtctcagaga
tctgcttcagcttccttcaaaagtgcttctaccattgtagaagacgatgtagattctcct
tcaagcgaagaagcagagcctgaagatcttaaccaagttgacagcagttcggaggaggaa
gagaacactagaggcaaaggacggaaaagacaagctactactaagagaggcagaggtaga
ggtacggtgacatcaaaacgtggtagaaaaaacgaaagctcttcttcacttcataggctg
ctcagtagcaaagacgaagacgaggacgaagatgatgaagatattgaaaagaagctaaac
agatctcagcctcgggttacaaggaactatggagctctaagaagataa
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