Brassica napus (rape): 106434587
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Entry
106434587 CDS
T04128
Name
(RefSeq) alpha-L-arabinofuranosidase 1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106434587
Enzymes [BR:
bna01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
106434587
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
zf-CHCC
Motif
Other DBs
NCBI-GeneID:
106434587
NCBI-ProteinID:
XP_013730910
UniProt:
A0A078HES6
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Position
A1:complement(28646323..28651029)
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AA seq
674 aa
AA seq
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MDTESWKFLRSVCLLSFLIGSCFVYQSLRVVVAQDEGTEPAVTLQVNASNGAGRLIPETL
FGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSIVGDQSSVYVATDRSSCFE
RNKIALRMDVLCGNKGCPPGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLAS
SNGSLTLASEKIIASASDVSNWTKKEVVLEAKGTDHGARLQLTTTKKGSIWIDQVSAMPV
DTYKGHGFRNDLYQMMSDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDV
WKYWTDDGLGHFEFFQLAEDIGAAPIWVFNNGISHNDEVETATIMPFVQEALDGIEFARG
DANSTWGSVRAAMGRKEPFELKYVAIGNEDCGKTYYRGNYIVFYDAIKKAYPDIKIISNC
DGSSRPLDHPAEYYDFHIYTSASKLFSMYHQFDRTSRKGPKAFVSEYAVTGKDAGKGSLL
AALAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFF
AESSGSTLLTSTLKGNSSSLVASAITWKNNEQDYIRIKAVNFGATSVNMKVLVTGLDPNV
MKVSGSKKTVLTSTNVMDENSFTQPEKVAPHESLLEMAEEDLTVILPPHSFSSFDLLKES
AKIRMTVSDSSSTL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggatacggagtcttggaagtttctcagaagtgtttgcttactttctttcctcattggc
tcttgctttgtctatcaaagccttcgtgttgttgtagctcaagatgaaggtacagaacca
gccgtgactttgcaagtcaatgcttctaatggagctggaagactcatccctgaaactctt
ttcggaattttcttcgaggagataaaccatgctggtgctggtggattatgggctgagctt
gttagcaaccgagggtttgaagctggtgggcagaacacaccgtctaatatttggccttgg
tccattgttggtgatcagtcatctgtctatgtagctacagaccgttcatcttgctttgaa
cgtaataaaatcgcattgagaatggatgtgctctgtggtaacaaaggctgtccaccagga
ggtgttggagtttataaccctggttactggggcatgaatattgaagaaggaaagaagtat
aaagtggctctttatgttcgttccactggtgatatcgatctgtctgtgtccttggctagc
tctaatggatctctgactcttgcttctgagaagatcatagcttctgcttctgatgtttca
aactggactaagaaggaggttgtattggaggcaaaggggacagatcatggtgcaagactt
cagttaacaacaaccaagaaagggtccatatggattgatcaagtctcagccatgccagtg
gatacttacaagggacatggctttagaaacgatctataccagatgatgtccgatataaaa
ccccgtttcatccgtttcccaggtggttgttttgtggagggtgaatggttaagcaatgcg
ttccgctggaaagaaaccgttggaccttgggaagagagacctggacattttggtgatgtt
tggaagtattggactgatgatggccttggccacttcgagttctttcaattggcagaagac
attggcgcagctccaatatgggtgtttaacaacgggattagtcacaacgatgaagttgaa
actgctactatcatgccctttgttcaggaggcacttgatggtattgagtttgctagggga
gatgctaactctacatggggatcagttcgagctgcaatgggacgcaaagagccttttgaa
ttgaaatatgttgctattgggaatgaggattgtggaaagacttactacagaggaaactat
attgtgttctatgatgctatcaagaaggcttatcctgatatcaaaatcatctctaactgt
gatggatcatctcgtccgctcgaccatcctgctgagtactatgattttcacatttacact
tctgctagcaaattgttttccatgtatcatcagtttgaccgcacttctcgcaaaggtcca
aaggcgtttgtgagtgaatatgctgtgacaggtaaagatgctggtaaaggaagccttctg
gccgctcttgcagaagctgcatttctcattggtcttgaaaagaacagtgacattgtggaa
atggcgagctatgcaccactctttgtgaacacaaacgacagaaggtggaaccctgatgca
atagtctttaactcctctcatctatacggaactcctagctactgggtccaacggttcttc
gctgagtcaagcggatcaactcttctaacgtcaacactcaagggaaactcttcttctctc
gtcgcatctgcaatcacctggaagaacaatgaacaagattacatacgcataaaggctgtg
aactttggagctacctcagtgaatatgaaggtgttggttactggattggacccgaacgtg
atgaaagtttcgggatcaaagaagacagtacttacatctaccaatgtgatggatgagaac
tccttcacacagccagagaaggttgcaccacacgaaagtttgctagagatggctgaggag
gatcttaccgttattctcccgccacactcgttctcttcgtttgatttgttgaaggagtct
gcgaagataagaatgacagtttctgattcttcttccactttatga
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