KEGG   Brassica napus (rape): 106434587
Entry
106434587         CDS       T04128                                 
Name
(RefSeq) alpha-L-arabinofuranosidase 1
  KO
K01209  alpha-L-arabinofuranosidase [EC:3.2.1.55]
Organism
bna  Brassica napus (rape)
Pathway
bna00520  Amino sugar and nucleotide sugar metabolism
bna01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    106434587
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.55  non-reducing end alpha-L-arabinofuranosidase
     106434587
SSDB
Motif
Pfam: ASD1_dom Alpha-L-AF_C CBM_4_9 zf-CHCC
Other DBs
NCBI-GeneID: 106434587
NCBI-ProteinID: XP_013730910
UniProt: A0A078HES6
LinkDB
Position
A1:complement(28646323..28651029)
AA seq 674 aa
MDTESWKFLRSVCLLSFLIGSCFVYQSLRVVVAQDEGTEPAVTLQVNASNGAGRLIPETL
FGIFFEEINHAGAGGLWAELVSNRGFEAGGQNTPSNIWPWSIVGDQSSVYVATDRSSCFE
RNKIALRMDVLCGNKGCPPGGVGVYNPGYWGMNIEEGKKYKVALYVRSTGDIDLSVSLAS
SNGSLTLASEKIIASASDVSNWTKKEVVLEAKGTDHGARLQLTTTKKGSIWIDQVSAMPV
DTYKGHGFRNDLYQMMSDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDV
WKYWTDDGLGHFEFFQLAEDIGAAPIWVFNNGISHNDEVETATIMPFVQEALDGIEFARG
DANSTWGSVRAAMGRKEPFELKYVAIGNEDCGKTYYRGNYIVFYDAIKKAYPDIKIISNC
DGSSRPLDHPAEYYDFHIYTSASKLFSMYHQFDRTSRKGPKAFVSEYAVTGKDAGKGSLL
AALAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSHLYGTPSYWVQRFF
AESSGSTLLTSTLKGNSSSLVASAITWKNNEQDYIRIKAVNFGATSVNMKVLVTGLDPNV
MKVSGSKKTVLTSTNVMDENSFTQPEKVAPHESLLEMAEEDLTVILPPHSFSSFDLLKES
AKIRMTVSDSSSTL
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggatacggagtcttggaagtttctcagaagtgtttgcttactttctttcctcattggc
tcttgctttgtctatcaaagccttcgtgttgttgtagctcaagatgaaggtacagaacca
gccgtgactttgcaagtcaatgcttctaatggagctggaagactcatccctgaaactctt
ttcggaattttcttcgaggagataaaccatgctggtgctggtggattatgggctgagctt
gttagcaaccgagggtttgaagctggtgggcagaacacaccgtctaatatttggccttgg
tccattgttggtgatcagtcatctgtctatgtagctacagaccgttcatcttgctttgaa
cgtaataaaatcgcattgagaatggatgtgctctgtggtaacaaaggctgtccaccagga
ggtgttggagtttataaccctggttactggggcatgaatattgaagaaggaaagaagtat
aaagtggctctttatgttcgttccactggtgatatcgatctgtctgtgtccttggctagc
tctaatggatctctgactcttgcttctgagaagatcatagcttctgcttctgatgtttca
aactggactaagaaggaggttgtattggaggcaaaggggacagatcatggtgcaagactt
cagttaacaacaaccaagaaagggtccatatggattgatcaagtctcagccatgccagtg
gatacttacaagggacatggctttagaaacgatctataccagatgatgtccgatataaaa
ccccgtttcatccgtttcccaggtggttgttttgtggagggtgaatggttaagcaatgcg
ttccgctggaaagaaaccgttggaccttgggaagagagacctggacattttggtgatgtt
tggaagtattggactgatgatggccttggccacttcgagttctttcaattggcagaagac
attggcgcagctccaatatgggtgtttaacaacgggattagtcacaacgatgaagttgaa
actgctactatcatgccctttgttcaggaggcacttgatggtattgagtttgctagggga
gatgctaactctacatggggatcagttcgagctgcaatgggacgcaaagagccttttgaa
ttgaaatatgttgctattgggaatgaggattgtggaaagacttactacagaggaaactat
attgtgttctatgatgctatcaagaaggcttatcctgatatcaaaatcatctctaactgt
gatggatcatctcgtccgctcgaccatcctgctgagtactatgattttcacatttacact
tctgctagcaaattgttttccatgtatcatcagtttgaccgcacttctcgcaaaggtcca
aaggcgtttgtgagtgaatatgctgtgacaggtaaagatgctggtaaaggaagccttctg
gccgctcttgcagaagctgcatttctcattggtcttgaaaagaacagtgacattgtggaa
atggcgagctatgcaccactctttgtgaacacaaacgacagaaggtggaaccctgatgca
atagtctttaactcctctcatctatacggaactcctagctactgggtccaacggttcttc
gctgagtcaagcggatcaactcttctaacgtcaacactcaagggaaactcttcttctctc
gtcgcatctgcaatcacctggaagaacaatgaacaagattacatacgcataaaggctgtg
aactttggagctacctcagtgaatatgaaggtgttggttactggattggacccgaacgtg
atgaaagtttcgggatcaaagaagacagtacttacatctaccaatgtgatggatgagaac
tccttcacacagccagagaaggttgcaccacacgaaagtttgctagagatggctgaggag
gatcttaccgttattctcccgccacactcgttctcttcgtttgatttgttgaaggagtct
gcgaagataagaatgacagtttctgattcttcttccactttatga

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