Brassica napus (rape): 106434636
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Entry
106434636 CDS
T04128
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106434636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106434636
03051 Proteasome [BR:
bna03051
]
106434636
Membrane trafficking [BR:
bna04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106434636
Proteasome [BR:
bna03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106434636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
STI1-HOP_DP
UBA_7
Rad60-SLD
CUE
UBA_NBR1_C
Dsc3_N
UBA_HOIP
Ubiquitin_5
Rad60-SLD_2
TBK1_ULD
RAWUL
Motif
Other DBs
NCBI-GeneID:
106434636
NCBI-ProteinID:
XP_048634722
LinkDB
All DBs
Position
A1:1646496..1649396
Genome browser
AA seq
511 aa
AA seq
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MVGEVDSNDPQTFVDGGGEVVPVNVRCSNGSKFIVRTSLESTVESFKALVAQNYDVPANH
QRLIYKGRILKDDHTLLSYGLQADHALHMVRGSAPPASQTTTAPSVTRGVASNTGGESLF
GFNPLGSGNAMPRGMFGAAGLPNLERAQQQLAQNPNMVRDMMNAPAIQNIMNNPELMRTL
IMSNLQMRELVDCNPELGHILNDPSVLRQSLEAAGNPELMREMTRSTDRAMSNIEATPEG
FNMLRRMYENVQEPLMNATTNNAGSNLFATTLLGNQGAASYNPMTTNGGTGTVNPVPNAN
PLPNPWGAAGGQTTTAGRTNSGGDTRAPGLGGLGMLGGDPTVGATPDASQMNQFLQNPAM
SQMMQSLLSNPQYMNQIMSLNPQLQSLMDSSPQVREMMQNPEFLRMLSSPETMQQMMSLQ
QSLLSGNRSTTTGNNGGLDSLMSIFGSLGAGGGLSGANQSNVVPPEELYATQLQQLEEMG
FFDRAENIRALRATNGNVNAAVERLLASMGQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgaagtagactcgaacgatccacaaaccttcgttgacggaggaggagaggta
gttcctgtgaacgtcaggtgctccaacggctccaaattcatcgtgagaacgagccttgaa
tcaaccgtagagtctttcaaagctctggtagctcagaactacgacgtaccagctaaccac
cagcgcttgatctacaagggacgcatcctcaaggatgatcacacgctccttagctatggc
ttacaggcggatcacgctcttcatatggttcgaggctctgcacctcctgcgagccaaact
actactgcacctagtgttactcgaggggttgcctcaaacactggaggagaatctttgttt
ggatttaatcctttaggtagtggaaatgctatgcctcgtgggatgtttggagctgctgga
cttccgaatctcgagcgagcacagcagcagctagctcagaacccaaacatggttagagat
atgatgaacgcaccagccattcagaatattatgaacaaccctgaacttatgaggactttg
ataatgagcaaccttcagatgcgcgagcttgtggattgcaaccctgagcttggacatata
ctcaacgacccgagcgtccttaggcagagcttggaagctgcggggaaccctgagcttatg
cgtgagatgacgcggagtactgatagggcgatgagtaatattgaagctactcctgagggg
tttaacatgcttaggaggatgtatgagaatgtccaggaaccgttgatgaacgctacaaca
aacaatgccggttctaatctgtttgctactactctcttggggaatcagggagctgcttct
tacaatcccatgacgaccaatggtggaacaggcacagtgaatcctgtgccgaatgcaaat
ccacttccaaatccttggggtgctgcaggtggtcagacaactacggctggaaggaccaat
tcaggtggggatactagagcccctggccttggtggactaggcatgctaggtggggatcca
acggttggtgctacaccagatgcctctcaaatgaaccagtttctgcaaaatccagccatg
tcacagatgatgcagagcttactttccaatccacaatatatgaatcagatcatgagtcta
aacccacaactccaaagcttgatggattcaagtcctcaggtgagggagatgatgcagaat
ccggagttccttcgtatgcttagctccccagagacaatgcagcaaatgatgagtctgcag
caatcactgttatctggaaataggagtacgaccacaggtaataacggagggctggattca
ttgatgagtatttttggcagtcttggtgctggtggtggcttgagtggtgcgaaccagtct
aatgtagtacctcctgaggagctatacgccacacaattgcaacaactagaggaaatggga
ttctttgacagagcagagaacattagagcgttgcgtgcaaccaacggcaacgttaacgct
gctgtagaaagactcttggcgagtatgggccagtga
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