Brassica napus (rape): 106434675
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Entry
106434675 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X1
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
bna
Brassica napus (rape)
Pathway
bna04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106434675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106434675
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106434675
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
HECT type E3
106434675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
106434675
NCBI-ProteinID:
XP_013730990
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All DBs
Position
A1:25412505..25419374
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AA seq
1031 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKEGDARKLLEQTRMERNRRLLQKKHNSAALKIQKFFRGRR
STAIVRSKVRRDFCETYGDNCQNVDRHCFEPASSFLPQFLFFFKAQSSGDFVMLVETCRL
LRNFAHSSGDILSLFSGLDYSTEHNTVDFRVKKLAFTCIEAIHQNRECLRDQLLVTPEEA
TISTAILMDAMSLLLDPKLPWVCKIVSHLQKRNIFKLVREIVTTAKEGSRSPTMNGSILS
LESVLFLVVPHVGREPCCCPVVDPRWSFSSMILTIPFIWQLFPNLKVVFANPSLSQHYVH
QMALCIQKDTHVLPIDTNTEFPGNACLLGNTLEIANVVLSQPECSLDMAIDIASVATFLL
ETLPPIKSSERESRHSSSEEDDDMLIDDVQELVLNRTLEQQITTNAIDSRFLLQLTNILF
HQVSGGTQSYDEDKEALAIATGSSFLYAAFNILPLERIMTVLAYRTELVAVLWNYMKRCH
ENQKWSSMPSVLAYLPADSPGWLLPLVVFCPVYKHMLTIVDNEEFYERGKPLSLQDNRLL
IIILKQALWQLLWVNPLTQHNSGISVSNDLSKKNRVDLIQNRVGVVIAELLSQFQDWNNR
QQFTSSTDFQADTVSEYFITQAIVEGTRASYILMQAPFLIPFTSRVKIFTTQLATARQSH
GSEEIFAGNRFRIRRDHILDDAYNQMSALSEDDLRGPIRVTFVNELGVEEAGIDGGGIFK
DFMEKITLAAFDVQYGLFKETVDHMLYPNPGSGMIHGQHLQFFHFLGSLLAKAMFEGILV
DLPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDLELYFVILNNEYGER
TEEELLPGGKDMRVTNKNVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPREWIDMFNE
HELQVLISGSADSLDIDDLRENTNYSGGYNAGHYVIDMFWEVMKSFSTENQKKFLKFVTG
CSRGPLLGFKYLEPAFCIQRAGGSVSNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMY
AISAEAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccttcgactcggaagcgtgtcgatttaggtggccggagcacc
aaggagggagatgcccgcaagcttcttgagcagaccaggatggagcgtaatcgtcgtctc
ctgcagaagaagcacaactccgccgccctcaaaattcagaaattctttagaggtagaaga
tcaacggccattgtgcgctccaaggtgaggcgtgacttctgtgaaacctatggtgataat
tgccagaatgtcgataggcattgctttgagcctgcttctagtttcctccctcagtttctg
tttttcttcaaggcgcaaagctcgggagatttcgtgatgcttgtggagacgtgtcgtcta
ctgcgaaattttgcccacagcagtggggacattctaagccttttctctggcttggactac
tctactgagcataatacggtggattttagagtaaagaaacttgcatttacctgcatcgag
gctatacatcagaatagggaatgtttaagggatcagctcttagttactccggaagaagct
accatttcaacagctatcttgatggatgcgatgtcgttgttgctagatcctaagctgcct
tgggtttgcaaaatagttagccatctacagaaaagaaacatattcaaactggtccgagaa
attgtgactacggctaaggaaggctcaagaagtccgactatgaacggcagcatcctttca
ctagaaagtgtattgtttctggtagtaccacacgttggccgtgagccatgttgctgccct
gttgttgatccacgttggagtttctcatctatgatccttaccataccctttatatggcag
ctcttcccaaacttgaaagtggtctttgctaacccaagtctaagtcaacactacgttcac
cagatggctttatgtatccaaaaggatacccatgttctcccaatagatacaaacacagaa
tttcctggtaatgcttgtcttcttggtaatacattggaaattgcaaacgtggtcttgtca
cagcctgaatgttcattggacatggcaattgacattgcatcagttgcaactttcttattg
gagacacttcctcctattaagtcatcagaaagagaaagcagacatagctcttctgaagag
gatgatgatatgttgattgacgatgtacaagaattagtcttgaataggactttggagcag
cagataactaccaatgctatagactcacgttttcttctgcagttaacaaatattttgttc
catcaagtttcgggtggtacgcagtcatatgacgaagataaagaagcactagctattgcc
acaggcagttcttttctgtatgcggcattcaacattctccctcttgagcgaataatgaca
gttttggcttatagaaccgagcttgtagctgtgttgtggaattatatgaagcgatgccat
gagaaccagaagtggtcatccatgcctagtgtcctagcttatcttccagcggattccccg
ggttggctattacctctggttgtcttttgtcctgtttataagcatatgcttacgattgtc
gataatgaggaattttacgaacgaggaaagccactatcgctacaagataacaggttgctc
atcatcattctcaagcaagctttatggcagttactgtgggtgaatccacttacgcaacat
aactctgggatatctgtctccaacgacctctcaaagaaaaaccgtgttgacttaattcag
aacagggttggggttgtaatcgctgagttactttcacagtttcaagattggaacaaccgg
caacaattcacttcctcgaccgactttcaagctgatacagtcagtgaatattttatcact
caggctatagtggaaggtacaagagccagctacatactgatgcaggctcctttcctgatt
ccgtttacaagcagagtcaaaatattcacaacacaattagcaacggcgaggcagagtcat
ggatctgaagaaatttttgctggaaatcggtttagaatacgaagagatcacatcttggat
gatgcttacaatcaaatgagtgcattgtcagaggatgatctccgaggaccaattcgtgtg
acgtttgtcaatgaactcggagttgaggaagccggtattgatggtggtggcattttcaaa
gactttatggagaaaattaccctagcagcctttgatgtgcaatatgggttgtttaaggaa
accgttgatcacatgctttatcctaatcctggatcaggaatgatacatggacagcatctc
cagttctttcattttctcggcagtcttctcgcaaaagctatgtttgaagggattctagtt
gatttaccatttgcaacgtttttcctcagcaaattgaaacaaaagtacaactatttgaac
gatctgccctctctggatcctgagttgtatcggcatcttatatttctgaagcgttataag
ggcgatatatcagacttggagctttactttgttattctgaacaatgaatatggagagaga
acagaggaagagctacttccagggggcaaagacatgcgagtcacaaataaaaatgttata
actttcattcatctggtttccaatcatcggctaaactttcagatacgccagcagagttct
catttcttgagggggtttcagcaactcattccgagagaatggatagacatgttcaatgaa
catgagctccaggttctcatatctggttcagctgatagtttggatattgacgacttgcga
gagaacaccaattattctggaggctacaacgctggacattatgtgattgatatgttctgg
gaagtaatgaaaagcttctcaaccgaaaaccagaagaagttcttgaaatttgtaacgggt
tgttcaagaggaccactgctcggtttcaagtacttggaacctgcattctgtatacagagg
gctggtggtagcgtgagtaatgaagcagttgatagactaccgacatcagccacttgtatg
aaccttcttaagcttccaccctatcaaagcaaagagcaacttgagaccaaattgatgtac
gccataagcgcagaagcaggctttgatctgagctga
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integrated database retrieval system
