Brassica napus (rape): 106434707
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Entry
106434707 CDS
T04128
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16-like
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106434707
Enzymes [BR:
bna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106434707
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Helicases
106434707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
106434707
NCBI-ProteinID:
XP_048634886
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All DBs
Position
A1:complement(1829347..1832571)
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AA seq
628 aa
AA seq
DB search
MGKAKFKPVGDVKPEAEEEVEKVEEVEEQRDAGAVAEEEEEEKEKSFEELGLDPRLIRAL
SKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSDSGRKKKPAPC
AFVLVPSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSDMRNALAGLPEILVTTPAC
IPKCFADGVLDPAAISESLEILVLDEADLLLSYGYEDNLRSVTSIVPRRCQCLLMSATTS
SDVEKLKKLILHNPVVLTLQEGSDKEEPVPSNVQQFWISCSAQDKLLHILALLKLEVVQK
KVLIFINTIDMGFKLKLFLEKFGIKTAILNGELPQNSRLHILEQFNAGLFDYLIATDDNN
QTKEKEEVKGDDNKDNKKNKRRFKPKLDAEFGVVRGIDFKKVHTVINYDMPQSVTGYIHR
IGRTGRAYSSGSSVSLVSPGEMEGFEEIKSFLAGEEDKDSDIITPFPLLTENAVESLRYR
AEDVAKSVTKISIRESRAQDLRNEIINSEKLKSHFEANPRDLDLLKHDKLLSKTAPSPHL
RDIPEYLVDAKTQEASKMVKLARAAMGNSRRSGGGNNTKKKRSRKGSDPLKTFNANGSKR
GRGGGGVGQKKDAKGSSDGSANKKQKTV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggcgaagtttaaacctgtgggtgatgtgaaacctgaagctgaagaagaagtt
gagaaagtagaggaagttgaagaacagagagacgccggagctgtagcagaagaagaagaa
gaagagaaagagaagagctttgaggagctagggcttgaccctcgtctcattcgcgcttta
tctaaaaagggtatagagaaaccaactcctattcagcaaacagccattccttacatcctg
gaagggaaagatgtggttgctagagctaagactggctcagggaagacattggcttacctt
cttcccttgcttcagaagctgttttcagactctgggaggaagaagaagcctgctccttgt
gcttttgttctcgttccttctcgtgagctgtgtcagcaggtctacacggaggtttcttgg
cttattgagttgtgtcgtgttcagcttaaagctgtgcagttgactagtagcatgcctgtt
tctgatatgcgtaacgcattggctggcttgcctgagattcttgtcaccacacctgcttgt
attccaaaatgttttgcagatggggttttggaccccgcagctattagtgaatcgcttgag
attttggttcttgatgaggcagatctgttgttgtcatatggatatgaagacaatctaagg
tcggtaacttcaatagtcccaagacgttgccaatgcctacttatgtctgctaccacaagt
tctgatgttgagaaattgaagaaattgattctgcacaacccggtagtcttgaccttgcaa
gaaggttctgacaaggaagagcccgtcccaagtaatgttcagcagttttggatttcttgc
agtgctcaggataaactactacacattcttgctctcctgaagctagaggttgttcagaag
aaagttctgatattcatcaatactattgacatgggtttcaagctgaagctattcttggaa
aagtttggaatcaaaactgcaattttaaacggggagctgcctcagaattctcggcttcat
atccttgagcaattcaatgcaggtctatttgattatttgattgcaacggatgataataac
cagactaaagaaaaggaagaggttaaaggtgatgataacaaggataataagaaaaacaaa
aggcgtttcaaaccgaagctggacgctgagtttggtgtagtcagaggaattgacttcaaa
aaagttcacacagtcataaactatgacatgcctcaaagtgtgacaggatacattcatcga
attgggcgtactgggagagcatatagcagcggttcttccgtttctctcgtttctcctggt
gagatggaagggtttgaagaaatcaaatccttcttagcaggggaagaggacaaggatagt
gatatcatcactcccttccctttgttgactgaaaatgctgtcgagtctttaagatacaga
gctgaggatgttgcaaagagtgttacaaagatttcgattcgagaatctcgtgctcaggat
ttgagaaatgagataatcaactccgaaaagttaaagtctcattttgaagctaatccaaga
gacttggatctattgaaacatgacaagcttctgagcaagactgcaccttcaccgcatcta
agagacatccctgagtatctagttgacgcaaagactcaagaagcgagcaagatggtgaaa
ctagccagagccgctatgggaaacagtaggagatccggtggaggtaacaacacaaagaag
aaacgatcgagaaaaggcagtgacccactcaaaaccttcaacgccaatggatctaagaga
ggacgcggtggtggcggtgttggccagaagaaagatgctaaaggatctagcgatggctcg
gctaacaagaaacagaagacagtttaa
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