Brassica napus (rape): 106434979
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Entry
106434979 CDS
T04128
Name
(RefSeq) nuclear pore complex protein NUP98B isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106434979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106434979
03036 Chromosome and associated proteins [BR:
bna03036
]
106434979
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106434979
Chromosome and associated proteins [BR:
bna03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106434979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
106434979
NCBI-ProteinID:
XP_048595841
LinkDB
All DBs
Position
A9:complement(11117854..11122742)
Genome browser
AA seq
1028 aa
AA seq
DB search
MFGASNPFGQGSSSSSPFGTQTQSVFGQNNNASSNNPFAPKPFGASSPFGAQTGGSMFGG
TSTGVFGQAQASSPFGASSPFGAQTGGSMFGGTSTGVFGQAQASSPFGASSQGFGSSTPS
FGAPSAPAFGNSPSPFGGTSTFGQNGFSTPQSSPFGSTTQQSQPAFGNSTFGSSTPFGAS
TTPAFGSTNTSAFGASSTPAFGSTNTSAFGASSTPAFGVSPTPAFGNSGTAFGNNAFGSG
GASGTPGFGASTTPAFGASTTPAFGFGSSPAFGQTTHSPFGAQGSQSSNSTTFGNQQQGG
SRIIPYTSTIDAESGTGAPGKLQSISAMTVHKEKCHEELRWEDFQRGDKGGKLPAGQASV
FSQPTNPFGQTSTNPTNPTHTFQSTIAPKPNPFGQTSTNPNPFGQTSTNPNPFGQTSTNP
TQAFQSTIAPNPNSFGQTAPTPSPFGQTSANPTTAFQSTITPNPNPFGQTAPTPSPFGQT
SANPTNPFQSTPNPFSQNTPATNTNFSSPFGQPTTPSLFGTSSNTTPGFAPSSGFAATTT
QPFGPSNTPSFASSSVFNSSGSSPSLFSSTPAQGSTPAFSSGNFNNSQSAQLFSSNPSFA
QTGFGQNTNTQPSIFSTPSTGFPNMSTSFPSSIAPLSQTKPSGPTLQQSTQPTQPSFSFN
NSGQTQTAAAGGLSFCPVNFGQVPASQPNPVSNLTATQPNPVASPFGTLPAVPQISIGQG
GNSPSIQYGISSLPVVDRPAPARVSSLLTSRHLLQRRVMLPARKYRAGDDSPKVPFFSDE
ENSNTPRADAFLTPRENPRALLIRSLKKETAAPLKDETTPLQENGKRSNGVITNGANNEN
KSNGEVRDAPPVKANETHENHGGDKNGAKSSPSRAEVESLLPKLHHAEYFTEPRVQELAA
KERANPGYTGRVRDFVVGRHGYGSIKFLGETDVRKLDLEKLVQFNNREVLVYMDESQKPP
VGQGLNKPAEVTLLNIKCMDKKSGKQVKEGPRVEKYKEMLKRKAEEQGAEFVSYDAVNGE
WKFKVEHF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgcatctaatccttttggacagggatctagcagcagcagtccttttgggacc
caaactcaatctgtgtttggtcagaacaacaacgcgtctagtaataatccctttgcgcca
aagccctttggtgcttctagtccttttggcgcgcagactggtggttctatgtttggaggc
acttcaaccggtgtgtttggtcaggctcaagcttcttccccttttggtgcttctagtcct
tttggtgcgcagaccggtggttctatgtttggaggtacttcaaccggtgtgtttggtcag
gctcaagcttcttccccttttggtgcttcatcacaagggtttgggagctctactccgagc
tttggagcaccttctgctcctgcctttggcaattctccttcaccttttggtggcacttca
acatttggacagaatggcttctcaacgcctcagtcaagtcctttcggaagcaccacacaa
cagtcacagcctgcttttggaaacagcactttcgggtcatctacaccctttggtgcctcc
accactcctgcctttggctctacgaatacatctgccttcggcgcctcaagcacacctgcc
ttcggctccaccaatacatctgccttcggtgcctcaagcacacctgcatttggcgtgtca
cccactcctgcctttggtaactctggcactgcatttggcaacaatgcttttggttctgga
ggtgcttcaggtacacctgggtttggcgcttcaaccactcctgcgtttggcgcttcaacc
actcctgcctttggttttggctcctccccagctttcggacagactacgcattctcccttt
ggagctcaaggttctcagtcttcgaactcaacaacctttggaaatcaacaacagggtggt
agtagaatcattccatatacatctacaatagatgcagagtctggaactggagcccctggg
aagctacaatcaatttctgctatgactgtccacaaagaaaaatgccatgaggagctcagg
tgggaggacttccagcggggagataaaggtggaaaacttcctgcgggtcaagctagtgtg
ttctctcagcccacgaaccctttcggccagacatctaccaatcctacaaatccaacacac
acctttcaaagcacaatagccccaaaaccaaaccctttcggccagacatctacaaaccca
aaccctttcggccagacatctacaaacccaaaccctttcggccagacatctacaaatcca
acacaagcctttcaaagcacaatagccccaaacccaaactctttcggccaaacagcacca
acccccagtcctttcggccagacatctgcaaacccaacaaccgcctttcaaagcacaata
accccaaacccaaaccctttcggccagacagcaccaaccccaagccctttcggccagaca
tctgcaaacccaacaaacccctttcaaagcacaccaaaccctttcagccagaacactcca
gcaactaacacaaatttctcgtctccttttggccaacctactaccccatccttgtttgga
acttcatcaaataccacacccggttttgcaccatcctctggttttgcagcaaccactacg
cagccatttggtccatcaaacactccttcatttgcctcttcgtcagtcttcaattcttct
ggctcctctccgtcactgtttagttcgactcctgcacaagggtcaactccagcatttagc
agtggaaactttaacaacagtcagtcagctcagctgtttagctcaaacccctcatttgca
cagactgggtttggacaaaatacaaatacccaacctagcattttcagtacaccttccact
ggattcccaaacatgtctacaagctttccatcaagcatcgctcccttaagtcaaacaaag
ccttctggtccgacactccagcaatcaactcagccaactcaaccatctttcagtttcaac
aactctggtcagactcaaacagccgctgcaggtggattgtcattttgtccagtcaacttc
ggacaagtgcctgcttcgcaaccaaaccctgtaagtaacctcactgctacgcaaccaaac
cctgttgcaagcccatttggaacgcttcctgctgtgcctcagatttcaattggtcaaggt
ggaaattcaccttcgattcagtatggaatctccagcttgcctgtcgttgatagacctgca
ccggccagagtgtcatcgctcctgacttctcgacatcttttgcaaagacgggtcatgctg
cctgcaagaaagtaccgtgctggggatgatagtccgaaggttccattcttcagtgatgaa
gagaactccaatacacctagggctgatgcgtttctcactccaagggaaaacccgagagct
ttgttaatacgctcacttaaaaaggaaacagcagcaccgctgaaggatgagacgacccct
ctgcaggagaatggtaagagatcgaatggggttattactaatggagctaacaacgagaat
aagagtaatggtgaagttcgtgatgctcctccggtaaaagccaatgagacacatgaaaat
cacggaggcgacaagaacggcgcaaagagttcaccaagtagagcagaggtcgagtcattg
ctgccaaagctgcatcacgctgagtatttcacagagccccgggtccaagaactagctgca
aaggaaagggctaatcctggttataccggacgggtgagggactttgttgtcgggagacac
ggttacggcagcataaagtttctaggagagacggatgtgcgtaagctcgacttggaaaag
ttggttcagttcaacaacagggaagtgcttgtgtacatggacgagagccagaaacctcct
gttggtcagggactgaacaagccagcggaagtaacgttgctcaacataaaatgcatggac
aagaagagcgggaagcaagtgaaggaaggcccgagggtggagaagtataaggaaatgctc
aagaggaaagctgaagaacaaggagctgagtttgtgtcttatgatgctgtgaatggcgag
tggaagtttaaggtcgaacatttttag
DBGET
integrated database retrieval system
