Brassica napus (rape): 106435539
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Entry
106435539 CDS
T04128
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
bna
Brassica napus (rape)
Pathway
bna00520
Amino sugar and nucleotide sugar metabolism
bna01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106435539
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bna01003
]
106435539
Enzymes [BR:
bna01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106435539
Glycosyltransferases [BR:
bna01003
]
Polysaccharide
Structural polysaccharide
106435539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
106435539
NCBI-ProteinID:
XP_013731890
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All DBs
Position
A6:complement(28899341..28902543)
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AA seq
686 aa
AA seq
DB search
MMMMMMPRCFVSLIQAFFLSLVLLLLHHVGGESQAASSHHRELLAYRRPLQDCPGCTTTT
ASSLPALHYDPDLKDVNIVATYSDHHGNIRLGSVKMGHLSSSWLFHNPLLPLPNNNKPPS
QLVTPRDSFQNDSRMEESASYSSTNQTENHFPHVEFTSPAKLNRQSLRQERRAQRTLELI
QQDKESDKQMQEAAIHKSMIFENSLVGKYSIWRRDFESPNADAILKLMRDQIIMAKAYAH
IAKSKNASNLYLFLMQQSRENQRVLGKATSDADLPSRALEQAKAMGHALSLAKDELYDCH
ELAKKFRAMLQSTERNVDGLKKKGTFLIQLAAKTFPQPLHCLSLQLAADYFLLGFNEEEE
DVVKKDAKFEDPSLYHYAIFSDNVLATSVVVNSTVLNAKQPEKHVFHIVTDKLNFAAMKM
WFRVNAPADATIQVENINDFKWLNSSYCSVLRQLESARLKEYYFKANHPSSISAGADNLK
YRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLAPLWEVDMQGKVNGAVETCK
ESFHRFDKYLNFSNPKISENFDAGACGWAFGMNMFDLREWRKRNITGIYHYWQDMNEDRT
LWKLGSLPPGLITFYNLTYAMERSWHVLGLGYDPALNQTAIENAAVVHYNGNYKPWLGLA
FAKYKPYWSKYVEYDNPYLRLCNINE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgccgagatgcttcgtttctctaattcaagccttcttcttatcg
ctggtattgctgctgctacatcatgtgggtggagagtcacaagcagccagcagccaccac
cgagaacttctagcttaccgtcgtccgttgcaagattgtcctggatgtactactacaact
gcttcctctcttcctgcacttcactacgatccagatctcaaagatgtgaacatagttgcc
acctacagtgaccatcacggtaatatacgccttggtagtgtcaaaatgggtcatctttca
tcttcttggcttttccacaatcctcttcttcctctccccaacaacaacaaacctccttct
cagctagtgacaccgcgggattcatttcaaaatgattctagaatggaagagagtgcaagt
tattcttctactaatcagaccgagaaccattttccacacgtggagtttacaagccctgcg
aaactgaaccgtcagagtttacgtcaagaaaggagagctcaacgtactctggagctcatc
caacaagataaggaatctgataagcaaatgcaagaagctgccattcacaagtccatgatc
tttgaaaactctctcgttggcaaatacagtatatggaggagagactttgagagccccaac
gctgatgctatcttgaagctcatgagagaccagatcattatggctaaagcttatgcccat
atcgccaaatccaaaaatgcatccaatctctaccttttcttgatgcagcagagtagagaa
aatcaacgtgttctgggaaaagcaacttctgatgctgaccttccttcaagagcgcttgaa
caagcaaaagccatgggccatgctctctctctggcaaaagacgagttatatgactgccat
gaacttgcaaagaagtttcgggccatgcttcaatccactgaacgcaatgtagatgggctg
aagaaaaagggcaccttcttaattcagctggccgccaagacatttccacagccattgcat
tgcctgagtctgcagctagcggcagactattttcttctcggtttcaatgaagaggaggag
gatgtagtcaaaaaggatgccaagtttgaagatccttctctctatcactatgccatcttt
tcagataacgtcctggcaacatcagtcgtagtcaactccactgtcctgaatgccaagcaa
ccggagaagcatgtcttccatatagtaacagacaaattgaattttgctgcaatgaagatg
tggtttcgcgtcaatgctcctgctgatgccacgattcaagttgagaacatcaatgatttt
aagtggctcaactcctcttactgctctgttctacgtcagcttgaatccgcaaggcttaaa
gaatactatttcaaagcaaaccatccttcgtctatctctgctggcgcagacaatctcaag
taccgaaacccaaagtacctatcgatgctgaatcatctgagattctacctgcctgaggtg
tatccgaagctggacaagatcctgtttcttgacgatgacattgtggtgcaaaaagacctg
gcacctctatgggaagtagacatgcaaggaaaagtgaatggtgcggtggagacgtgtaaa
gaaagcttccacagatttgacaagtacctcaacttctctaatccaaagatctcagagaat
ttcgatgcgggggcttgcgggtgggcgtttggcatgaatatgtttgacctgagagagtgg
aggaaaaggaacatcactgggatatatcattactggcaagacatgaatgaagatagaacg
ctgtggaagctgggttcgttgccaccggggttaatcacattctacaacctgacctatgca
atggagcggagctggcacgtgctggggctaggctatgacccagctctcaaccagacagct
atagagaatgcagcggttgtgcactacaatgggaactacaagccatggctgggtttggcg
tttgccaagtacaaaccttactggtccaagtacgtcgagtacgataacccttacctccgt
ctatgcaacatcaatgaatga
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