Brassica napus (rape): 106435561
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Entry
106435561 CDS
T04128
Name
(RefSeq) auxin response factor 8 isoform X1
KO
K14486
auxin response factor
Organism
bna
Brassica napus (rape)
Pathway
bna04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106435561
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
Motif
Other DBs
NCBI-GeneID:
106435561
NCBI-ProteinID:
XP_013731921
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Position
C4:complement(41957061..41961727)
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AA seq
844 aa
AA seq
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MKLSTSGLVQQSHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEV
DGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSK
QPGNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRH
IFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRAIRPQTIVPSSVLS
SDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRML
FETEESSVRRYMGTITGISDLDSVRWSNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT
FPMYPSLFPLRLKRPWHAGTSSLHGIHPPFVSSPKLLVAINLNHCGVTDGRGELGSGLPW
LRGGGGGEQQGLLPLNYPSVGLFPWMQQRLDLAQLGTDNNQQYQAMLAAGLQNMGGGDPL
RQQFVQLQEPPPSHHQYLQQSASHNSDLMLQQQQQHHLMHAQTQIMCENLPQRQEVSKQQ
PAGGGGQQSVDQNAYLNALKIQNGQLQQWQQHSDMPSPSSFMKADFTDKFATTASPIQQN
SASPGSGHGSNLLNFSITGQSALPEQLIGEGWSPKASNTFSEPLSLPPQAYAGKSLALEP
ASANVNPSVFGVDPGSGLFLPSTVPRFASSSSGGDVEAYPVSLADSGFENSLYNSCMQDT
TPELLHGVGQINPSNQTKNFVKVYKSGSVGRSLDISRFSSYHELREELGKMFAIEGLLED
PLRSGWQLVFVDKENDILLLGDDPWESFVSNVWYIKILSPEDVQEMGDHGEGSGGSLPQN
PTHL
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtcaacatctggattggttcaacaaagtcacgaaggagagaaatgtctgaac
tctgagctatggcatgcttgtgctggaccactggtatctcttccatcatctggaagccgc
gttgtctactttccacagggtcacagcgaacaggtagctgctacaactaataaggaagtt
gatggtcacatacccaattacccaagcctaccaccgcaattgatttgccagctccataac
gttacaatgcatgcagatgtggagacggatgaagtctatgctcaaatgacacttcaacca
ttgacaccggaggagcagaaggaaacatttgtaccgatagagttggggataccgagcaag
caacctggcaattacttctgtaagactctcacagctagtgatactagtactcatggcgga
ttttctgttcctagacgcgctgctgagaaagtttttcctccactggattactcactgcag
ccaccagcgcaagaactgctcgcaagagatctccatgatgttgaatggaaatttaggcac
atctttcgtggacaacccaaacggcatctcttaactactgggtggagtgtatttgttagt
gctaagcgactagtagctggagattctgtcattttcataaggaatgaaaagaatcaactg
tttttgggaatacgtagagccattcgtccacagacgatagtaccatcatctgttttatca
agtgatagcatgcatattggactcctagctgctgctgcacatgcttctgcaaccaacagt
tgttttactgttttctttcatccaagggctagccaatctgagtttgtgatacaactttcc
aagtacattaaagccgtttttcacacccgtatctcagttgggatgcgcttccgcatgctc
tttgagactgaagagtccagtgtccgcaggtacatgggtactataactggtatcagtgat
ctggattctgttcgttggtccaactctcattggcgatctgtgaaggttggttgggatgaa
tcgacagcaggggagagacagccaagggtttctttatgggagattgagcctcttactacc
ttccccatgtatccatctctgtttcctctcaggctcaaacgtccttggcatgctggcacc
tcgtccttacatggtatccatccaccatttgtctcttctcctaaacttttagtagctatt
aacttgaatcactgtggtgttacagatggaaggggtgaattgggaagtgggctaccatgg
ctgaggggaggtggtggaggagagcagcaaggtttgcttcccctaaattatccatctgtt
ggtttgtttccatggatgcaacaaaggctggatctcgctcaactcgggactgataataat
cagcaataccaagcaatgctggccgctggactacagaacatgggcggcggagatcctctc
agacaacagtttgtccagttgcaagagcctcctccttctcaccaccagtatcttcaacaa
tcagcttcccacaattctgatttgatgcttcaacagcagcagcagcaccatctcatgcat
gctcaaactcagattatgtgtgagaatcttcctcagcgacaagaagttagtaagcagcaa
ccagctggtggtggtgggcagcaatcggtggaccaaaatgcatatcttaatgctcttaaa
atccaaaacggtcaacttcaacagtggcagcagcactctgatatgccttctccttcttcc
ttcatgaaagctgattttactgacaaatttgcaacaacagctagtccgattcaacaaaac
tctgcctctccggggtctggacatggcagcaatcttttgaacttctctataaccggtcag
tctgcactgcctgagcagttgataggagagggttggtctccaaaagcatccaacactttt
tctgaaccgttgtcacttccaccacaagcgtacgctgggaaaagccttgctctagaacct
gcaagtgccaacgtgaatccttctgtattcggtgttgatcctggatctggactattcctc
ccaagcacggttcctcggtttgcttcttcttcatcaggaggagatgtggaagcttaccca
gtgtcactagcggattcagggtttgagaattccttatacaacagctgcatgcaagacaca
actcctgagttgttgcatggagttggacagataaacccctccaaccaaaccaagaacttt
gtaaaggtttataaatcaggttcggtagggcgatcactagacatctcccgattcagcagc
tatcatgagctgcgagaagagttagggaagatgtttgctatcgaagggttgttggaagac
ccccttagatcaggctggcagcttgtattcgttgacaaggaaaatgatattcttctcctt
ggcgatgacccctgggagtcatttgtgagtaacgtttggtacataaagatactatccccg
gaagatgtgcaagaaatgggggatcatggtgaaggcagtggtgggtctctcccccaaaac
ccgacccatctctaa
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