Brassica napus (rape): 106435563
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Entry
106435563 CDS
T04128
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
bna
Brassica napus (rape)
Pathway
bna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106435563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106435563
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106435563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
106435563
NCBI-ProteinID:
XP_013731926
UniProt:
A0ABQ8ENN3
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Position
A1:23500056..23502319
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AA seq
312 aa
AA seq
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MANLPPSLSMGTPFGGPSNSAGAPANKDRNLASAEQLVLDLSNPELRENALLELSKKREL
FQDLAPLLWNSFGTIAALLQEIVSIYSVLAPPNLTPAQSNRVCNSLALLQCVASHSDTRM
LFLKAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCL
RTMEMGSELSKTVATFIVQKILLDDVGMDYICTTAERFFAVGRVLGNMVQSLVEQPSPRL
LKHIIRCYLRLSDNPRACAALGSCLPDSLRDGTFSNCLREDQIARRWLQQLVHNVGVGRV
PSHQGGGFEHML
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctacctccatctctctcaatgggcactcctttcggtggtcccagcaattct
gccggagctccggcgaacaaagatcggaacttggcctccgcggagcagttggttctcgat
ctcagcaatcccgaactccgagagaatgctctcctcgagctttccaagaaaagagaactg
tttcaggatttggcgcctctcttgtggaactcttttggaaccattgctgccttattacag
gagatagtttcgatctactctgttcttgcacctccgaatctgactcctgctcagtccaac
cgtgtttgcaattcacttgcccttcttcagtgtgtggcatctcattccgacacgagaatg
ttgtttctcaaggctcacatcccactctacctttaccccttccttaatacaacgagtaag
tctagaccttttgagtacttgcgccttactagcctaggtgtcattggtgctcttgtcaag
gttgatgatacagaggtcattagcttccttctttcaacggaaattattcctctctgcctt
cgcaccatggagatggggagtgagctgtccaaaaccgttgcgacattcatagttcagaag
atcttgttagatgatgtggggatggattacatctgcacaacagcagagcgtttttttgct
gttggtcgagttttgggcaatatggttcagtcactagtggagcagccttctccacgcctt
cttaagcatatcattcgttgttacctccgtttatcagacaacccaagggcttgtgctgca
ctcggaagctgtctccctgactctctacgagatggaaccttcagcaattgtcttcgcgag
gatcaaatcgcgaggaggtggctgcaacagttggttcacaatgttggagttggtcgagtc
ccaagtcatcaaggtggaggatttgagcacatgctttga
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