Brassica napus (rape): 106435599
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Entry
106435599 CDS
T04128
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106435599
Membrane trafficking [BR:
bna04131
]
Protein recycling
Others
EARP complex
106435599
Endosome - Golgi transport
Tethering complex
GARP complex
106435599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
COG5_N
EXOC6_Sec15_N
COG2_N
TTI1
Motif
Other DBs
NCBI-GeneID:
106435599
NCBI-ProteinID:
XP_013731959
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Position
C9:1158492..1163284
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AA seq
782 aa
AA seq
DB search
MATEAAPMDEKAKRMRDLLSSFYTPDPSISTPTSSISTSFDNINGPSFDADQYMDLMIKK
SNLDVLLQRHVQMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKSNIFGMEGNMDQLL
HKIMSVQSRSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPARLQKCIKSEAYGDAV
RFYTGAMPILKVYGDTSFKDCRRASEEAIETIIKNLQTKLFSDSESIQARAEAAVLLKQL
DVPVDSLKDKLLEKLEQSLDGLQINPDEASKLAEHNVSSKDEESNNQGPAKIHEDAVRGF
SEAMRAYREIFPDSEERLFKLARALTTTHFENMELYIRKRVSAADFLGIFRIIWEDVVLM
DEVLPEAALSDLSAEAAQVTLKQFVARTFSHLQQDISDTLLKFDINQKEVVDGEVLKVVL
EASGKAVLQGTTDIFQEFRQLLDENTGIFVKMNDLLIGWIQKGFQDFFRSLESHFLVLSG
KTSSSNETEGLVEGKSSEKIHAGLILVLAQLSVVIEQKVIPRIAEEITASFSGGNSQAFI
PGELCRVFHAASEKLLQHYIDTRTQKISNVLRKRFKTPNWVKHKEPREVHMYVDMLLQQL
EEVGKEVKQILPQGTFRKHKRSDSNGSNTTTSSRSTTLHSDKMARSNSQRARSQLFETHL
AKLFKQKVEIFTKVEFTQESVVTTTVKLCLKSLQEYVRLQTFNRSGFQQIQLDIQFLKAP
LKETVEDEAAIDFLLDEVIVAASERCLDVTPLEPPILDKLIQAKLAKSKEHNNNNNKTTV
SS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaggcggctccgatggacgagaaggcgaagaggatgagagatctactctcg
agcttctacactccggatccttccatctccacccctacttcctcgatcagcacctccttc
gacaacatcaacggcccttccttcgatgccgatcagtacatggatctcatgattaagaag
tcaaatctggatgtgcttttgcaaagacatgttcaaatggctgctgagattaagaatctg
gatacagatttgcaaatgctggtctatgagaattacaacaagttcatcagtgctactgat
acaatcaaaaggatgaagagtaatatctttgggatggaaggcaacatggaccagcttctt
cacaagataatgtcagtgcaatcgaggagtgatggggttaacacttctctttttgaaaag
agagagcatatagagaaactgcaccggacacgtaatcttcttcgtaaagttcagttcatt
tatgatttacctgcacgactccaaaaatgcataaagtcagaagcttatggtgatgctgtc
aggttctatactggagcaatgccaattctcaaggtatacggtgatacatcattcaaagac
tgcagacgagcttctgaagaagctatagaaaccatcattaagaacttgcagacgaagcta
ttttcagattcagaatccatacaggcgagagctgaagctgcagtgcttcttaagcagtta
gatgtcccagttgatagcttaaaggacaaactcttggaaaagctggaacaatctcttgat
ggtctccaaataaatcccgatgaggcaagtaaacttgcagagcacaatgtttcatctaag
gatgaggaaagcaataaccaaggtcctgctaaaattcatgaggacgctgtacgtggattt
tctgaggctatgcgtgcttatcgagaaatattccctgactcggaagaaagactttttaaa
ctcgcgagagccttaacaacaacgcactttgagaacatggagctatacataagaaaacgg
gtgtctgcagcagattttcttggaatttttcgaattatatgggaagatgtggtacttatg
gacgaggttctacctgaggctgcgctctctgatttatccgcagaggctgcccaagttact
ctgaagcaatttgttgcgaggacgttttctcatcttcaacaagatatatcagatacactc
ttaaaattcgatatcaaccaaaaggaagtagttgatggggaagtactgaaggttgttctt
gaagctagtggaaaggcggttcttcaaggcaccacagatatatttcaggagttccgtcag
cttcttgatgaaaacactggaatatttgtcaagatgaatgacctactcatcggttggatt
cagaaaggatttcaagacttcttcaggtcacttgagtctcacttcctagtgctctcagga
aaaactagctcatcaaacgagactgaaggtttggttgaaggaaaatcgagtgagaaaatt
catgctggtctcatccttgtgctggcgcagctctctgtcgtcatcgaacaaaaggtcatc
ccgagaattgctgaggaaataactgcttccttctctggcggaaactcccaagcttttatt
cctggagaactctgccgggtcttccacgcagccagcgagaaacttctccagcattacata
gacacgagaacacagaagatatcgaatgtactaagaaagaggttcaagacaccaaactgg
gttaagcacaaggagccacgagaggttcacatgtatgtcgatatgcttcttcagcagttg
gaagaagtcggtaaagaagtgaaacagattctacctcaaggaactttccgaaagcacaag
agatcagacagcaacggaagtaacactacaacctcatcacggagcactacactacatagc
gataagatggcacggtcgaactcacagagagctcgaagtcagcttttcgagacgcatctt
gcaaagctgttcaagcaaaaagtagaaatattcaccaaggttgaatttacccaggaatca
gttgtaacgacaacagtgaagctgtgtctgaagagtttgcaagaatatgtgcggctccaa
acgtttaacaggagcgggttccagcagattcagctagacattcagttcttaaaagctcct
ttgaaagaaacagtcgaggacgaagctgctattgacttcttgctcgacgaggtgatcgtt
gcggcttcagagaggtgtcttgatgtgactccattggaaccaccaatcttggacaaactc
atacaagccaagctcgctaaatctaaggaacacaacaacaacaacaacaagaccaccgtt
tcctcttga
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