Brassica napus (rape): 106435835
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Entry
106435835 CDS
T04128
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 15b
KO
K13098
RNA-binding protein FUS
Organism
bna
Brassica napus (rape)
Pathway
bna03015
mRNA surveillance pathway
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106435835
09122 Translation
03015 mRNA surveillance pathway
106435835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106435835
Spliceosome [BR:
bna03041
]
Complex A
Other components
Complex A specific factors
106435835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
106435835
NCBI-ProteinID:
XP_013732221
LinkDB
All DBs
Position
A3:4945418..4947743
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AA seq
395 aa
AA seq
DB search
MSGKYNQDGGGGAPIPSYGGDGGYGGGDAGYGGRSASGGRGGYGGGGRGNNRGGGGYQGG
NRGGRGGGGGRDGDWPCPNPSCGNVNFARRVECNKCGAPAPSGTGDRGGRRGASDRGGGG
LDSGSRSYESSSRYDGGSRSRGDSGSYGSNSQHRDNSSYGQGPPPPPLAAIPSYDGSGSY
PPAMGYGMEAVPPPSSYAGGPPSYGGPTGGYGVDAPRGGRGGGYDAPRRQESSYGDAPAE
KVKQCDANCDETCNNARIYISNLPPDVTVDELKDLFGGIGQVGRIKQKRGYKDQWPYNIK
LYTDEKGKNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKIGVTMAEKSAPKAPAFDQRGG
GGRGGGGYGGGDRRRDNYGSGPDRNHHGGNRSRPY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtaagtacaatcaagacggcggcggcggtgcgcctattccgtcgtacggtggt
gatggaggttatggaggcggtgatgctggatacggaggacgcagtgcctctggcggacgc
ggtggttacggcggtggcggtagaggaaacaaccgtggcggtggtggatatcaaggaggc
aatcgcggtggaagaggaggtggcggcggcagagatggtgattggccttgccctaatcca
agttgtgggaacgtgaactttgcaaggagagttgaatgtaacaagtgtggtgcgcctgct
ccttctggcactggggaccgaggaggtcgccgaggggccagtgatcgtggtggtggtggt
cttgatagtggtagtaggagctatgagagtagtagtagatatgatggtggcagtaggagt
agaggtgatagtggctcgtacggtagtaatagtcaacatagggataatagttcttatggt
cagggtcctccacctcctcccttggctgctattccatcctacgatggttccggcagttac
cctccagccatggggtatggaatggaagcagttcccccgccttcaagctatgccggtggt
cccccttcttatggtggtcccacagggggttatggtgttgatgcaccgaggggtggtaga
ggtggtggctatgatgctcctcgacgccaggaatctagttatggagatgcacctgctgaa
aaagtcaagcagtgtgacgcgaattgtgatgaaacatgtaataatgccagaatatacatc
tctaatttacctccggatgtgaccgttgatgaactcaaggatctctttggtggcattggc
caagttgggagaatcaagcagaagcggggttacaaagatcagtggccctataatatcaag
ctttacactgatgagaagggaaagaataaaggtgacgcctgcctggcttatgaagatccc
agcgccgcacactctgcaggcggctttttcaacaattatgaaatgagggggaacaagatt
ggtgtaacgatggcagagaagtctgcgcccaaagctcctgcttttgatcagagaggcggt
ggtggtagaggaggaggtggctatggtggtggagatagaagaagagataactatggttca
ggaccagacagaaaccaccatgggggaaaccggtctcgtccatattga
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