Brassica napus (rape): 106435949
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Entry
106435949 CDS
T04128
Name
(RefSeq) THO complex subunit 7B
KO
K13176
THO complex subunit 7
Organism
bna
Brassica napus (rape)
Pathway
bna03013
Nucleocytoplasmic transport
bna03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106435949
09122 Translation
03013 Nucleocytoplasmic transport
106435949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106435949
03041 Spliceosome [BR:
bna03041
]
106435949
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106435949
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106435949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
PUMA_CC
DUF1818
SAB
DUF7795
Motif
Other DBs
NCBI-GeneID:
106435949
NCBI-ProteinID:
XP_048614233
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All DBs
Position
C5:55835578..55836847
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AA seq
236 aa
AA seq
DB search
MSVKARRISGRLETVVAKPTYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV
LEVDKEEDNYAECNRLAKAFLQELTTFEIPLLKSRAVVEANVREKESFDEVKVETERQIM
QAKGEIEELKRQLEESKIERQHKEECETIRKLISAQPPRAETEKVIAELKREIAELEAES
TASWRLLELRKKQFALLLHVVDELQNTMEDEQKSLVDEIRTAVEDQRNTTEPMSVD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaaagcaaggaggatctccgggagattagagactgtagtagccaaacctact
tacgccttcgaccccgtcgacgatgacaagatcataagaaaccgtctcctcacccgaacc
accaccacacgaggcgagcctccgttaaagaagctccagaagaagttcacttccttcgtc
ctcgaagtcgacaaagaggaagacaactacgccgagtgcaaccgcctcgcgaaggccttc
ttgcaggagctaaccaccttcgagatccctcttctcaagagccgggcggtcgtggaagct
aacgttagggagaaagagagcttcgacgaggtgaaggttgagaccgagaggcagatcatg
caggcgaaaggtgagatcgaggagctgaagaggcagcttgaggagagtaagattgagagg
cagcataaggaagagtgcgagacgattaggaagttgatctccgcgcagccgccgagggcg
gagacggagaaggtgattgctgagttgaagagggagattgctgagcttgaagcggagagc
actgcgagctggaggttgcttgagttgaggaagaagcagtttgctctcttgttgcatgtg
gtggatgagttgcagaacacaatggaagatgagcagaagagtctagtggatgagattcgg
acagccgtggaagatcagaggaacacaaccgaacccatgtctgtggattaa
DBGET
integrated database retrieval system