Brassica napus (rape): 106436051
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Entry
106436051 CDS
T04128
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like
KO
K14848
ribosome assembly protein RRB1
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bna03009
]
106436051
Ribosome biogenesis [BR:
bna03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106436051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
NBCH_WD40
WD40_RFWD3
PALB2_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
106436051
NCBI-ProteinID:
XP_013732464
LinkDB
All DBs
Position
A9:complement(40352959..40355377)
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AA seq
473 aa
AA seq
DB search
MVRSINPKKAKRKNKNKGEASSSSIPSMPTRVWQPGVDKLEEGEELQCDPSVYNSLHGFH
VGWPCLSFDILGDKLGLNRTEFPHTLYMVAGTQAEKAPLNSIGVFKISNVSGKRRDVVPK
TLLNGDDAMEDEDDEDEDSDSDEESEDGGASTVPIIQVRRVAHHGCVNRIRAMPQSPHIC
VSWADSGHVQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPAT
PGRLLSGDCMSMIHLWEPASGSWTVDPIPLAGHTASVEDLQWSPAEANVFASCSVDKTVA
VWDVRAGKSPALSFKAHDADVNVISWNRLASCMLASGSDDGAFSIHDLRVIKDGDAKVAH
FEYHKHPITSIEWSAHESSTLAVSSGDNQLTIWDLSLEKDEEEEAEFKAQTKEQVNTPQD
LPPQLLFVHQGQKDLKELHWHNQIPGMIISTAADGFNILMPYNIQNTLPDLAP
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagcataaaccctaagaaagcaaagaggaagaacaagaataagggagaagcg
tcttcttcatctataccatcgatgccaacaagggtttggcagccaggtgtggataagctc
gaagagggagaagagcttcagtgcgacccttctgtttataattcccttcatggcttccat
gttggttggccctgtttgagttttgacattttaggtgataagttgggtttgaacagaaca
gagtttcctcacacattgtatatggtggctgggactcaggctgagaaagcacctttaaac
tccataggagtatttaaaatcagcaacgtgtctggtaaaagacgcgatgtagtgcctaag
acgctactgaatggtgatgatgctatggaggatgaggatgatgaagatgaggacagtgat
agcgatgaggaaagcgaagatggaggagcttccactgttccaattattcaggtccgcagg
gttgctcaccatggatgtgttaaccgcattcgcgcaatgccacagagtcctcatatctgt
gtctcttgggcagattctggtcatgttcaagtgtgggacatgagctctcatcttaatgct
ttagcggagtcagaaacagaaggcaaagatggaacttcgccggttcttaaccaagctccc
ttagttaacttctctggccacaaagacgaaggttatgctattgattggagtcctgcaacc
cctggaagacttctttccggtgactgcatgagtatgattcatttgtgggagccagcttct
ggttcatggactgttgatcccattccgcttgccggtcacactgcaagtgttgaagattta
caatggagtccagctgaagcgaacgtgtttgcatcatgttctgtggacaagaccgttgca
gtttgggatgtcagagctgggaagtcacctgcattatctttcaaggcacatgatgcagat
gtgaatgtcatctcatggaacaggctggctagttgcatgttggcatcagggagtgatgat
ggagcattctctatccatgatcttagagttatcaaggatggagatgctaaggtagcacat
tttgagtatcataagcatcctatcacgtcgattgagtggagcgctcatgaatcctcaaca
cttgcagtctcttccggggataaccagctcacgatatgggatttatccttggagaaggat
gaagaagaggaagcagagttcaaagcacagaccaaggaacaagttaacacacctcaagac
ttgcctcctcagcttctcttcgttcaccaggggcaaaaggacttgaaggaacttcactgg
cacaaccagattccagggatgatcatctcaactgctgcggatggtttcaacatcttgatg
ccttacaacattcagaacacacttcctgatctcgctccctga
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