KEGG   Brassica napus (rape): 106436568
Entry
106436568         CDS       T04128                                 
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
bna  Brassica napus (rape)
Pathway
bna00040  Pentose and glucuronate interconversions
bna01100  Metabolic pathways
Module
bna_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106436568
Enzymes [BR:bna01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     106436568
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim DUF6383
Other DBs
NCBI-GeneID: 106436568
NCBI-ProteinID: XP_013732976
UniProt: A0ABQ8AM93
LinkDB
Position
C3:57069452..57071113
AA seq 421 aa
MASARSLVAKANNTNVGSLILMTVVLGSCIANGEYLGARRGLAAVAGNPTVFDITKNGAV
GNGATDSSKAFLNTWLQVCASPVPATLLVPKGDFLAGPVIFAGPCKSKVTVEVQGTIIAP
PSGYPTPEWFLFEHVDNVVLTGPGTFHGKGEAVWKADGCGKKVDCNLPPTSLKFRNILNL
DISGISSVNAKAFHMFLVKTTNVNVQNIKITAPAESPNTDGIHLSNAVNVHIVDSLIATG
DDCISVGRGSTNVTVERVTCGPGHGLSVGSLGKYPNEENVAGIHFKKCTMKDTDNGLRIK
SWGGSSPSTAVDITFEDIMMTNVKNPIIIDQNYGSRGGDSKVAISNVLFKNVRGTTITKD
EVQIMCSKSVPCKGVSVVDVELNFVGDKGGHPSASGGLVGALCDNANVIFGGKLSFPMCP
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggctagcgcgagaagtttggttgccaaggcaaataatactaatgtaggctcattaatc
ttaatgaccgtggtgttaggttcttgtatagctaatggtgaatatctcggtgcccgccgt
ggccttgccgctgttgccggaaaccctacggtctttgatattactaagaatggagcagtg
ggaaatggtgccaccgattcttccaaggcgtttctaaacacatggctccaagtgtgtgcc
agtcctgtaccagcaacgctactagtccctaaaggagatttcttggctggtccagtaatt
tttgctggtccatgcaagagcaaagtgaccgtcgaagttcagggcacaatcatcgctcca
ccaagcggatacccgactcctgaatggttcttattcgaacatgtcgataatgtcgtcctc
accggacccggcacattccacggcaaaggtgaagccgtttggaaagcagatggctgtggt
aaaaaggtggactgcaatcttcctccaacgtctctaaaattcagaaacatcttaaacctt
gacatttccggcattagctcggtcaacgcaaaggccttccacatgttcttggtaaaaact
acaaatgtcaacgtccaaaacatcaagattactgcccctgctgaaagtcccaacaccgat
ggtatccatttgagcaatgcggtcaacgttcacatcgttgacagtttaatagctacagga
gacgattgtatctcagtcggtcgtggttccaccaatgtaaccgtcgagcgcgtgacttgt
ggcccaggacacggcctaagtgtcggtagtcttggtaagtacccgaacgaggagaatgtt
gccggcattcactttaagaagtgcaccatgaaagatactgacaatggtcttagaatcaag
agttggggtggttcgtctccaagcacggctgtggacatcacgtttgaagatattatgatg
acaaacgtcaagaacccaatcatcattgaccaaaattacggctcaagaggcggagattca
aaagttgcgataagcaatgtgctgttcaagaacgtaagaggaacaacaattacaaaagac
gaagttcagatcatgtgcagcaaatcagtaccgtgcaaaggagtcagcgtcgttgacgtg
gaattgaactttgtaggtgacaaaggaggacatccctcggcgtcaggaggtttggtcgga
gctctttgtgacaacgccaatgttatcttcggtggaaaacttagcttccctatgtgtccc
aaataa

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