KEGG   Brassica napus (rape): 106436832
Entry
106436832         CDS       T04128                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bna04121]
    106436832
Enzymes [BR:bna01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106436832
Ubiquitin system [BR:bna04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    106436832
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-RING_Vps41 Prok-RING_1 zf-C3HC4_3 zf-RING_16 SLX1_C Rad50_zn_hook RINGv zf-RING_4 zf-RING-like
Other DBs
NCBI-GeneID: 106436832
NCBI-ProteinID: XP_013733231
LinkDB
Position
A9:40908278..40908805
AA seq 175 aa
MDPIAISVFIIFVAVSITVSISFLVRRLRARSLLPPSLPSLIRRLCVARSPSLGDCSICL
SPFKPEDQLRRLPLCSHAFHLDCISTWLISNKTCPLCRSPLGHAKETASIAADVAHDGSR
SWLRSLSRGVSSRALSFRSSSSFFTGSSRRGGTVEVVDLEAGDEFIEYLQWLSTL
NT seq 528 nt   +upstreamnt  +downstreamnt
atggatcccatcgcgataagtgtcttcatcatcttcgtcgccgtctcgatcaccgtctcc
atctcttttctcgtccgacgtctccgagctcgctctctcctccctccatcactcccttct
ctcatccgacgtctctgcgttgctcgctctccatccctcggcgattgctccatctgcttg
tcgccgttcaagcctgaggatcaactacgtcgtctcccgctctgttcccacgctttccac
ctcgattgcatcagcacctggctcatctcgaacaagacctgtcctctctgccgctctcct
ctcggtcacgctaaggaaacagcgagtattgcagcggatgtagctcacgatggttccagg
agctggctgagatctctctctcgtggtgtatcttcccgtgctctgtcctttagaagctcg
agttcgtttttcaccgggagcagtcgtcgtggcggcacggtggaggttgtggatttagag
gccggagatgagttcatcgagtatttacagtggctctcaactctttga

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