Brassica napus (rape): 106436832
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Entry
106436832 CDS
T04128
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106436832
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106436832
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
106436832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-RING_Vps41
Prok-RING_1
zf-C3HC4_3
zf-RING_16
SLX1_C
Rad50_zn_hook
RINGv
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
106436832
NCBI-ProteinID:
XP_013733231
LinkDB
All DBs
Position
A9:40908278..40908805
Genome browser
AA seq
175 aa
AA seq
DB search
MDPIAISVFIIFVAVSITVSISFLVRRLRARSLLPPSLPSLIRRLCVARSPSLGDCSICL
SPFKPEDQLRRLPLCSHAFHLDCISTWLISNKTCPLCRSPLGHAKETASIAADVAHDGSR
SWLRSLSRGVSSRALSFRSSSSFFTGSSRRGGTVEVVDLEAGDEFIEYLQWLSTL
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcgcgataagtgtcttcatcatcttcgtcgccgtctcgatcaccgtctcc
atctcttttctcgtccgacgtctccgagctcgctctctcctccctccatcactcccttct
ctcatccgacgtctctgcgttgctcgctctccatccctcggcgattgctccatctgcttg
tcgccgttcaagcctgaggatcaactacgtcgtctcccgctctgttcccacgctttccac
ctcgattgcatcagcacctggctcatctcgaacaagacctgtcctctctgccgctctcct
ctcggtcacgctaaggaaacagcgagtattgcagcggatgtagctcacgatggttccagg
agctggctgagatctctctctcgtggtgtatcttcccgtgctctgtcctttagaagctcg
agttcgtttttcaccgggagcagtcgtcgtggcggcacggtggaggttgtggatttagag
gccggagatgagttcatcgagtatttacagtggctctcaactctttga
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