Brassica napus (rape): 106436834
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Entry
106436834 CDS
T04128
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bna03019
]
106436834
03041 Spliceosome [BR:
bna03041
]
106436834
Messenger RNA biogenesis [BR:
bna03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
106436834
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106436834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106436834
NCBI-ProteinID:
XP_013733234
UniProt:
A0A078J8R6
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All DBs
Position
A9:40915728..40918934
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AA seq
418 aa
AA seq
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MQRLKQQQQQQAMMQQALMQQQSLYHPGLLTAPQIEPIPSGNLPPGFDPTSCRSVYVGNV
HIQVTEPLLQEVFASTGPVESCKLIRKEQSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI
KVNWAYASGQREDTSAHFNIFVGDLSPEVTDAMLFSCFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQDAQTAIDEAGGKWLGTRQIRCNWATKGATSGEDKISSDSKSVVELTSGVS
EDGKDTCNGDAPENNAQYTTVYVGNLGPEVSQVDLHRHFYSLGAGVIEEVRIQRDKGFGF
VRYSTHVEAALAIQLGNTHSYLGGRQMKCSWGSKPTPPGTASNPLPPPGPAPIPGFSASD
LLAYERQLAMSKMAGMNPMMHHPQGQHALKQAAMGATGSNQAIYDGGFQNAQQLMYYQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcagagattgaagcagcagcaacagcaacaagcgatgatgcagcaagctttgatgcag
caacagtctctctaccatcccggactcctcaccgctcctcagatagaaccaatcccaagt
ggaaatcttccccctggttttgatccaacttcttgccgcagtgtgtacgttggaaacgtc
catattcaggtgacggaacctctgctccaagaggtttttgctagcactggtcctgtggaa
agctgtaagcttattaggaaagaacagtcttcctatggttttgtccactactttgaccga
agatctgctggtctggctatcctctctctcaatggaaggcatttgtttggacagcctatc
aaagtgaactgggcttatgctagtggccagagggaggatacatcagctcactttaatata
tttgttggggatttgagcccggaggttactgatgcaatgctgtttagttgcttctctgtc
tacccaagttgctcggatgcaagggttatgtgggatcagaaaactgggcgttcaagagga
tttggttttgtttctttccgaaaccagcaggatgcccagactgcaatagatgaagcaggc
ggtaaatggcttggtaccaggcagattcgctgcaactgggcaacgaaaggagccacttct
ggtgaggacaagatcagctctgattccaaaagtgttgtggaactaaccagtggtgtctct
gaggatggcaaagatacatgtaacggtgatgctccagagaacaatgctcagtacacaact
gtctacgttgggaatcttggtccagaggtttctcaggttgatcttcaccgccacttctat
tctcttggtgctggagttattgaggaggttcgtatccaaagagacaaaggttttggattt
gtaagatactctactcatgtagaggccgccctcgctatccagctggggaacacacattcc
tacctcggtggcaggcagatgaagtgttcttggggaagcaagccaactccaccaggaaca
gcatcgaacccgcttcctccaccaggtcccgcaccaatccctggattctcagccagcgac
ctcttggcttacgagaggcaactagcgatgagcaagatggcgggaatgaatccgatgatg
catcacccgcagggacaacacgctctcaagcaagctgcgatgggggccactggttcaaac
caggccatctatgacggtggtttccagaacgcgcagcagctcatgtattaccagtga
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