Brassica napus (rape): 106437247
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Entry
106437247 CDS
T04128
Name
(RefSeq) uncharacterized protein LOC106437247
KO
K13144
integrator complex subunit 7
Organism
bna
Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bna03041
]
106437247
Spliceosome [BR:
bna03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
106437247
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
HEAT
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
106437247
NCBI-ProteinID:
XP_013733637
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Position
A1:complement(5889085..5893972)
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AA seq
1126 aa
AA seq
DB search
MEKVSAACAMDWSIKLEKALRSKNPVRAVEAILETGEKLQQWSKEPEPGTAVYSLFGLVP
EEDRLFYNTILLRVVDAFCYGDKLVKVAVVRVFMSVFKLSRGKSKSDCESWFLSKAKVYN
HLEMLKRVKHVYDKGDSEAKALALILFGCWRDFASEFAPVRYLIFTSLVSSHDLEVRSSL
FAAGCFCEVADDFALVVLGMLNDMVKFPELMPKTRLAAVRVYAKMGSSHAIANRAFKICM
TLMMESSKDDSLVAFLVSLTKLSSRSTHLASELAEVIMPFLCEDKSPHVRAAVLRCLHFL
IKRGMCFSLVHVSETAKFSSLLKQADLSADMQLKALQIFQKILVYKLCLADPSELHQLIA
LVENASQSQIFSSSCLAISILVGIWKEIVRTAEIRSIDVSSTSLPLQLVVLVMDRLTSLA
QLCSDPCQVDFALVGEVQDLFNVLHLLVGKQSEVRLLVLDKVRLFLVNLTDGLRKPDGAH
ELLLGVINYKSKRGVVVRSELLASIHKFLIVFLENVECDNKSVLSQVYEKVKRVTECVRS
CTFFDCHTQMIFTLLLHSPVLWGSNNDADGDSGVSLVDDMFNYGNVSLECSTQIIAERNY
WPAYRAGVYAARLGAWVTSALIFDKLKTNAESDINSFWLKSLTYLSHAEGKLQLLLMPSG
SFKLVNWLKSNSCLPELSKDASGEFAHCVALHEAYMNLQSSLGMLGNIKASSEVFSFQTW
FLVLKTRVMETVIDLVECLGLLNQDVCNKKQVTGCNSLKQLPRISIQLQKLAKEFDMLET
CFVDIDSSSSSIISTLSLSCSVLAFAAGVVIFIPRFSFHETLPTFTSQIGVCSRLVQDLV
QRLWKVDPKICELLSMLVKENESQSCSHVQPRNQVLKVCNKVKMLLSVCRDVLACIHGLQ
NWSNSMQEEDIMSEISKSCRNLLSQAVMKWMQIPFGIPKYFFNIRPCVGAELFALSSDRS
KSTTETISVEQGFQLSLDLCLQLKNIQQPRVPVRLTKLYCLLYTKLAYHIPIQHGETTRN
QKSYSPWRDEDLVEMSGKLFHHAVTKSGKKPEVSGRLDWSIGVSAVVQFQPNERGQGFSS
CLLDVSRFPIGSYQIKWLSGCIDQHGSYWNLLPLSGKLVFTVKKAS
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtttcagcagcttgcgccatggattggagcatcaagctcgagaaagccctt
cgttctaaaaacccagttagagctgttgaagccatcttggagactggtgagaagcttcaa
cagtggagcaaagaaccagagcctggaactgcagtttacagtttattcggtttggttcct
gaagaagataggctcttttacaatactatcctactgagggtggttgatgcgttttgctat
ggggataagcttgttaaggttgctgttgttcgggtgtttatgtctgtgttcaagctaagc
cgagggaagagtaaaagcgattgcgagagttggtttttgtcaaaggctaaggtgtataac
cacttggaaatgcttaaacgagtgaagcatgtgtatgacaagggtgatagtgaggctaaa
gctttggctttgattctgtttggttgctggagagactttgctagcgagtttgctccggtt
cggtacttgattttcaccagtttggtttcttcacatgatcttgaggtaagatcatctctg
tttgctgcaggttgcttttgtgaagtagcagatgactttgcattggttgttttggggatg
ttaaatgatatggtgaagttcccggagctaatgccaaagaccaggttagctgctgtgcga
gtttatgcaaaaatgggatcctcacatgcaattgctaatagagccttcaagatctgtatg
acgctaatgatggagtcttcaaaagacgacagtttggttgcattcctggtttccttgact
aagctttcctcaagatctactcatcttgcttctgaactggcagaggttatcatgccattt
ctgtgtgaagataagagccctcatgtccgagctgcggtactaagatgtctccactttctc
attaaaagaggcatgtgcttctctcttgtccatgtcagcgaaactgcaaagttttcaagc
ttactaaaacaagcagatctctcagctgatatgcagctcaaagctcttcaaatttttcaa
aagatacttgtctacaaactatgtttggctgatccatctgaactgcatcagctcatagct
ttagttgagaatgcatctcaatctcagatcttctcaagcagctgtttagctatcagtatt
ttggtgggtatctggaaagaaatagtccggacagcagaaataagatcaattgacgtatct
tcaacgtctcttcctctgcagctcgttgtattagtcatggacaggcttacctcactggca
caattatgttctgatccctgtcaagttgactttgcgctagttggtgaggttcaagacctc
ttcaatgttctccacctgttagtcggaaaacaatctgaagtgaggctgctagtgctcgac
aaagtcaggttattcctagtgaacttaacggatggcttaagaaaaccagatggagctcat
gaactactgctaggtgttatcaattataaaagtaaaagaggggttgtcgtgaggtcagag
cttttagcatcaatacacaagttcctgatagtgttcttggagaatgtcgagtgtgataat
aaatctgttctgtctcaagtttatgaaaaggtgaagcgtgtcactgagtgtgtgcgttcg
tgcaccttctttgattgccacacacagatgatattcactttgctattacactcgccagtt
ctttggggaagcaataatgatgcagatggagattcaggcgtctcacttgttgatgatatg
tttaactatggaaacgtttctcttgaatgttcgactcagattatagcggagagaaactac
tggcctgcttatagagctggagtttacgcagcacgtttgggtgcatgggtcacatctgcc
ttgatttttgacaagcttaagaccaacgccgagtctgatattaactctttttggttaaaa
tcattaacctatttatctcacgctgaagggaaactgcaactgcttctcatgccaagtggt
agtttcaagttagtcaattggttgaagagtaacagttgtttaccagaactctccaaagat
gcatctggagagtttgcccactgcgtagctcttcatgaagcgtatatgaatttacaatcg
tctctaggaatgttggggaatattaaagcatcgagtgaagtgttctctttccaaacgtgg
ttcttggttctaaagactcgggtaatggaaactgtgattgatctcgttgaatgcctcggg
ctgcttaaccaagatgtctgcaacaagaagcaggtgactggttgtaattctctgaaacag
cttcctcgtatctctattcagcttcaaaagttggcgaaggagtttgatatgttagagacg
tgttttgttgacatagacagtagcagctctagcatcatctcaactctctcactgagctgt
tcagttctggcttttgctgctggagttgtcatctttatcccacgtttttcgtttcatgaa
actttgcctactttcacttcgcagattggtgtttgctcgaggcttgtacaagatttagtt
caaaggctgtggaaagtggatcctaagatctgcgaattgcttagtatgctcgtgaaggaa
aacgaatcacaaagctgttcccacgtgcagcctaggaatcaagtacttaaagtctgtaac
aaagtgaagatgctgctatctgtttgcagagatgttcttgcatgcattcatggattgcag
aactggtctaattcaatgcaagaagaggacattatgtctgagattagtaaaagttgccgg
aatctactttcacaagcagttatgaaatggatgcagattccttttggcattccaaagtac
ttctttaatataaggccttgtgttggcgctgagctatttgctcttagttcagacagaagc
aagagtactactgagacaatttcagtggaacaaggctttcaactgtcacttgatctttgt
cttcagttgaaaaacatacaacaaccaagagtccctgttcgactcacaaaactgtattgc
ctcctctatactaaactagcttatcacatcccgattcagcacggtgaaaccacaagaaac
caaaagtcttattctccttggagagatgaagatctggtagaaatgagtggcaagctgttt
catcatgctgttacaaagtctggtaagaagcctgaggtttcaggtcgacttgattggagc
attggtgtctctgcggttgtgcagttccaaccaaatgagagaggacaagggttttcgagc
tgcttgctagatgtttctcgtttcccaattggttcgtatcagataaaatggctaagcggt
tgcattgatcagcacggttcttactggaatctcttacctctcagtggcaaacttgtgttt
accgttaagaaagcttcttga
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